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16-0443-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Anatomical entity
/structure development stage		 Phenotype
flower (PO:0009046)
  • abnormal (PATO:0000460)
    (Flowers::others)

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 4463001 [Map]; Strand: w
      • AT3G13650.1 - [+] show detail - Disease resistance-responsive (dirigent-like protein) family protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 16-0443-1 - 5-prime edge 
    CGNGAAAAAC TAACAAAATC GGTTATACGA TAACGGTCGG TACGGGATTT 
    TCCCATCCTA CTTTCATCCT CTAGACATAG ACACCATCAA GAAGAAAAAA 
    AAAACNCATN CCACATTNTC CACTCNNGGC AAAACTNATC CTCATNATNG 
    TCNCCCAAAT CCTCCTNATC GNAGCCGTNG TTTCCGCCGG TAANGGNNAA 
    AACTTTGCAA AANCCATNGA CAAAAAACNT TTNGGCCTCC GTANGGNNAA 
    ACTCACTCNT TTCCGGGTNT ACNGGCNCNA CNTTTTAAGC GGNTNAAACC 
    CTANTTNGGN CGGGATNAAC CCTCCTNTNT CCAACTTTTC CTTTTTNGGA 
    TGGGNCNCNG GGATCGANAN CCGATTAACT NCGGNGGNCG GGGGGAATTA 
    CCANCCNGGG CCGTNNACCN CNCGNGCCCC TATAA

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 4462998 [Map]; Strand: w
      • AT3G13650.1 - [+] show detail - Disease resistance-responsive (dirigent-like protein) family protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 16-0443-1 - 3-prime edge 
    TGAAAACGGT AGAGGTATTT TACCGACCGT TACCGACCGT TTTCATCCTA 
    GACTATATAT AGTAGAAGAA GACGATGGCG TAGGTACCGA AATATTAAAT 
    ATTTGTGCCA CGAAAACATG GGCGGTATTA TTATTACAAG TCGTCGTATT 
    ATTCGAGCCA TAAACCAATA ATTGTACATG CAATTAAGCT

AT3G13650.1

Model type
Protein coding
Short Description
Disease resistance-responsive (dirigent-like protein) family protein
Computational Description
Disease resistance-responsive (dirigent-like protein) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: lignan biosynthetic process, defense response; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Plant disease resistance response protein (InterPro:IPR004265); BEST Arabidopsis thaliana protein match is: Disease resistance-responsive (dirigent-like protein) family protein (TAIR:AT1G55210.2); Has 851 Blast hits to 850 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 851; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR