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16-0451-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 23368222 [Map]; Strand: w
      • AT3G63240.1 - [+] show detail - DNAse I-like superfamily protein
        Distance: -630; Region: promoter
    Flanking Genome Sequence: 16-0451-1 - 5-prime edge 
    CCACCAACAA CAATTGTCAC TTTATGTTTT TGGATTCGTA TTTATATTTT 
    TATCATAGGA AAAAGGGAAT TAACACGTTT ACCAATATTT ATTTGCAAGG 
    CACTTTTTAG TAAAATGTGA GTTTTATAAA ATTTGAGTTC TGTTGTGTGG 
    AAAGAGGAGG AAATGCTTTT GACCCAAAAT CTAGACTAAT GCGAGACTCT 
    GCCTCGTCCT CTTGGACCAT CTATTACTTT ATCAAACTTT TAATTTCAAA 
    CGTATAAGAC CCCCAACTTT ATTATTGCAA CGATACAATG TGACAATGTG 
    ACATTGCATA TATATTATAT CCATCCACGT GATGTGAATG CTAGCTTATA 
    TATAGCATAT GAGAGTAACA TATGGTACAA TTTATACGAA CATAAGATGG 
    GTTTGAATTA CTGTGCCTTA GGGTTTGGGC AGAGTCAACT TTCAAACTGA 
    AAATAACCCT ATTTGTTTAA ACACAAGACA GAAAAATATA TGATCTTGTG 
    GGGTTAACTT ATGGGGGGCA ATGCTCTAAN ATTTTGCTTT ATCTAACTTT 
    TCANGATTAT AAAATCGAGT GTTCACTTTT AAGACATTGN TTGATGAATT 
    TATGCCGATA TAATTTTGGG NGGNNANGTT AAAATGACNC ATGCCTGCAT 
    GGTGGGAGAC CGTGTCTGNG TTGNGNNCAG NNCAATACTT AGGNTTANNA 
    AATNGGGGGN TTANTTTTNT TTCAAAAGAA CNTTTTGNCN T

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 2021323 [Map]; Strand: w
      • AT3G06520.1 - [+] show detail - agenet domain-containing protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 16-0451-1 - 3-prime edge 
    TANCCNTTGT CNCNNCNCNN NANCNNNCCN NNANNACTTA CANANNCTTC 
    CCGNNNCATG NAAACGGNAG NAGTATTTTA CCGACCGTTA CCGACCTGNT 
    CNCATCCNGG CTATANTNNT GAAGGAGGAA CTGGTCTNAT GTCCTAGGNT 
    TATACCNCNT CTCTCACANG GATCTGACTC ACGNAATCAT CTCTANTAAA 
    TTNAAAGTGT TCNACAGNGC ACTNATNNNN ANCTANTAAA CAAAGTATAC 
    GAGCACAATA NCAAGANCCN TTGNAAGCTA CNANNCTAGN CNNCCNGANN 
    NNNNATTNCC CNTNGATCAN ANNNANNGGN CCNCNNGGCN NANGNCNAAC 
    NANCANCAAG TAGANAACNA NACNACAACA NNNGCNGCGT NGCGNANCNN 
    CAAGAGANAG NNTTATNANN TANANTGNAN NGNNCTNTNT GGNGANTGGT 
    ATACTNTCTC NCNNCTCCAC TTCTATATCA NNTATCTNCA NCANCNNATN 
    NACNNANNCA CCGNNANCCC NCATNCCNGN CNNCAANCAA TAAANGANAN 
    CCCGNGCNNN GNGNANNNCN NCTCCCNCNC CCNCCNCCCG NTNNTNGTNT 
    NNNGTCNATT NGANGTNNAG NANNCTCNTC NNTNTNNNCN GCTTNNNNGT 
    TNACNNNGAN TTCTNGCANC TATCNTCCCN TGANNNTCTT TNNNTCCNCC 
    GCNCNTTCNG CNCANTANCN TCCNNNCGAN NCNTTTAGAN CGNCNCNCCG 
    NNNCCGCANA GNTTGAATTA TANTNNNTCN AACNANNNTN GNNGGCNATC 
    GANNTGNNCN CNCNTNCTAA TNNGCTGNCT ATGTNNTNAN NTTNTNCNNN 
    NCNNANNNTT CCATTNTANN NTNCCTTTAN NCGTTNTNTN NTTTTNTNCC 
    CNGNTCNTTN NCTAGTNCCT TTAGNNGTCC ATCTNAAANC CTTNCCGANN 
    ACCCNNCNCC GNCNCANGAN

AT3G06520.1

Model type
Protein coding
Short Description
agenet domain-containing protein
Computational Description
agenet domain-containing protein; FUNCTIONS IN: RNA binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Tudor-like, plant (InterPro:IPR014002), Agenet (InterPro:IPR008395); BEST Arabidopsis thaliana protein match is: agenet domain-containing protein (TAIR:AT1G09320.1); Has 523 Blast hits to 271 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 518; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G63240.1

Model type
Protein coding
Short Description
DNAse I-like superfamily protein
Computational Description
DNAse I-like superfamily protein; FUNCTIONS IN: hydrolase activity, inositol or phosphatidylinositol phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Inositol polyphosphate related phosphatase (InterPro:IPR000300), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: CVP2 like 1 (TAIR:AT2G32010.2); Has 2363 Blast hits to 2040 proteins in 223 species: Archae - 0; Bacteria - 0; Metazoa - 816; Fungi - 600; Plants - 662; Viruses - 0; Other Eukaryotes - 285 (source: NCBI BLink).
Link
InterPro Scan - TAIR