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16-0493-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 2335041 [Map]; Strand: w
      • AT4G04630.1 - [+] show detail - Protein of unknown function, DUF584
        Distance: -2241; Region: intergenic
      • AT4G04632.1 - [+] show detail - Protein kinase superfamily protein
        Distance: 4545; Region: intergenic
    Flanking Genome Sequence: 16-0493-1 - 5-prime edge 
    TCCGAAACTC TCACTAGTCT GCAAGACCTT CCGCACTCTC CTCATATCTA 
    ACGAGCTCAC CGTGGCGCGA GTGCAACTTA AAACCTACGA AAGTTTTTTT 
    CATGTCTGCT TAAAGTTTCC AGATAAACCT AATCCATCAA TGTTCACCCT 
    CTGGATAAAA CCTGGTCAAA TCTTAACCAA CCAACTTGAG AAGAACGAGA 
    GGTCTACAAT ATTAGAGTGT GGGCTTCCAA CCTAAAACCA ATTGGCAATA 
    AGTGGAGAGG CCCATATCTT ATATATACCA CTTAAGATCC TACTCAACTT 
    CCGATGTGGG ACATTGTCCC TAATACGCCC CCTCGAGATG ATGGCTCTTC 
    TAGCCATTGA TCTCGATATG TTTGGGCATG GATCGGCGAG CGAAGTATTG 
    GGCCGGACCG ATGTGGATCG GGTTGAGTAT GTGCGGATCG GGCTCTGATA 
    CCATATTANA GTGTGGGCTT CCAACCTAAA ACCAATTGGC AATANGNGGG 
    AGAGACCCAT ATCTTATATN TNCCACTTAA GAACCCTACT GAACTTNCGA 
    TGNGGGANAT NGNNCCCTAA TNTACNNGAN CTANTNGGGG GGGACAAATA 
    CCNNNTNNAA ATNGNNNNTT GGCCNNNTTN CCNNNNNNNN GGTGGNNCNA 
    ANNNTNNNGN CTGGGNNANN NNNGGNNNNG NNNTNNANAN GNNNNNCNNN 
    ANNNGNGGGN NNNNNNNGN

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 10162908 [Map]; Strand: w
      • AT5G28180.1 - [+] show detail - Galactose oxidase/kelch repeat superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 16-0493-1 - 3-prime edge 
    GTTTCGGATA GTACGATCTC GATATGCGGG CTAAACAGTT CAAGACGATT 
    TCATCAGGGA GCGACAAAAA CGTCAGCTTC TTTTCCTTTC TAGAGAAAGT 
    TTTGTAAAGT AAGGACACAA CGAAGAGTAG CACCAACACA ACGAAGAGCC 
    AAAGAAAAAT CAACCAAAAG CTAATCATGA TCAAGGATGT AACAAGCGTA 
    CACAGGGATT CAAAGAAAAG GAAGGAAGCC GATGAAACCA AACAAGAAGA 
    TTCGTCAAGG AGACTTATTT GCGATGGAAT TGTTCAAAAC TCTAAAGACG 
    CCAGTCGTCA ACTAGAAGTT ATGATGATAA CACTAATATG ATCTGGATTT 
    GAAGTTTAAT GGCCTTTATT GGGTTTAATT GTTAATTTAT CAATTAGGCC 
    CATTTGTCAC ATTTTCTTTG ATTCTAACGT ACAAATACTT TAACTTATAT 
    AAAATAGTTA AATACAATTT AAAAAAAACG AAATTTTTAT TCTAGGTTTG 
    GTTATACAAC ATTTTGAAGC AACATTTGTT TCAACCTTAA AAGTGTATGA 
    GCCCTTGATT TGGGTTAATT GTTAATTTAT CAATTGGGCC CATTTTGGAA 
    GTGAAAAGCT CGCCGAAATC TGTCGTTTGG CTTGCANCAC TTGGAATTNG 
    NGGCTTTGGC TGANATCGGC NAACAGAAGG GGGAGACCTG AGGANAACGC 
    GGGACCCATN GNTGGCCTCG TCACTGGAGT TGGGGCGCCG N

AT4G04630.1

Model type
Protein coding
Short Description
Protein of unknown function, DUF584
Computational Description
Protein of unknown function, DUF584; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF584 (InterPro:IPR007608); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF584 (TAIR:AT4G21970.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G04632.1

Model type
Protein coding
Short Description
Protein kinase superfamily protein
Computational Description
Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G45670.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G28180.1

Model type
Protein coding
Short Description
Galactose oxidase/kelch repeat superfamily protein
Computational Description
Galactose oxidase/kelch repeat superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT5G28160.1); Has 1351 Blast hits to 1291 proteins in 95 species: Archae - 4; Bacteria - 70; Metazoa - 262; Fungi - 0; Plants - 990; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink).
Link
InterPro Scan - TAIR