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16-0494-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 9303972 [Map]; Strand: c
      • AT1G26850.1 - [+] show detail - S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
        Distance: 0; Region: exon1 (5UTR)
      • AT1G26850.2 - [+] show detail - S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
        Distance: 0; Region: exon1 (5UTR)
      • AT1G26850.3 - [+] show detail - S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 16-0494-1 - 5-prime edge
    GNGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCTC TATTCCTTCC TTCTTTTCTC CGTCATCATC
    ATTTTTCCCA CCGACAACAA TCTCTCGGAG TTTGGGTATT ACTACTTCTC
    ATCAACCAAT TGTATACCAC TGGATCTCCC AGATTCCTTC GTTATCTCTG
    TATGTTCCTT CTTTCCGACC AATCTATCTC TGTTTTGTCA GATCGGGCTT
    ACTTTTTAAT AATCTGTTTT GTTTCTCAAT CTGTTAATAA CTAATAACGT
    AGTAGTAGTA GTTAAAGACT AGTGTTTTGT TGTAGCTTGT TTTATTAGAT
    CTCTTTCGTT ATTCTTACGG AAGATTTGAT TTATTGCTTC TCTTTCAAGA
    CAAAGTTTTT ATTTTTATGA ATGTCTCTGT TCTAGTTTTA ATAACATAAC
    AGATTTGAGA TTCTCTTTTG NCTCTTTANT ATAATTGGCT TGTTTTTGAT
    CTGGNGGNGG NGGNGNNATG NCTNTATCTA CNTATTNAAA NNTAAAGNTC
    CANNNCNGGG GCCGNNNAAC ANNCCNGCGC NNNNNNNA

AT1G26850.1

Model type
Protein coding
Short Description
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Computational Description
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; LOCATED IN: Golgi apparatus, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT4G18030.1); Has 1056 Blast hits to 1041 proteins in 100 species: Archae - 0; Bacteria - 128; Metazoa - 0; Fungi - 0; Plants - 923; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G26850.2

Model type
Protein coding
Short Description
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Computational Description
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; LOCATED IN: Golgi apparatus, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT4G18030.1); Has 1056 Blast hits to 1041 proteins in 100 species: Archae - 0; Bacteria - 128; Metazoa - 0; Fungi - 0; Plants - 923; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G26850.3

Model type
Protein coding
Short Description
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Computational Description
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; LOCATED IN: Golgi apparatus, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT4G18030.1); Has 1039 Blast hits to 1012 proteins in 98 species: Archae - 0; Bacteria - 124; Metazoa - 0; Fungi - 0; Plants - 910; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).
Link
InterPro Scan - TAIR