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Mutant Lines
16-0497-1

16-0497-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 4; Position: 402366 [Map]; Strand: w
- AT4G00930.1 - [+] show detail - COP1-interacting protein 4.1
  Distance: 1632; Region: intergenic
- AT4G00940.1 - [+] show detail - Dof-type zinc finger DNA-binding family protein
  Distance: 954; Region: intergenic

CTAATAACAG TTACTTTTTA ATAAATATAT GAATATATCC ATGCGTGTGT 
CTATTTGGTA AAAAATGCAA AGAGACATGG GTCATCTTTG GTCTTCTCAT 
GCGAATAAAA ACAAACTAAA TCAAATAGAA ATAGAATCTC AGTGGGAATT 
TGAGAAAACG ATTTGTGATT AATTTGGAAT AGTCTTTACT TAGTTGGAGC 
AGGTATATTG TCGTGTCTTT TTATTACGCC AAAATAATAA CAATATATAA 
TAAGAATACT ATGTTACTTT TTAATGATGA TTTTATATTA CAGGTCGTGT 
TGTATTCAAT ACGCAATTGT TCATGACTTC ATGGACAGTT GGTCTCCTTA 
ATTAGTTTCC TAATTAGACT TTGCTTTCGA GATAAGTCTC ACACAAAATT 
GAATTGATTC AAACATTTAC ATAACAACTA ATTGGAGCCA TGCATGATCT 
AGAAACTACT CATCCGTCCT ATATCCTAGA TCATTAAGTC ACGATCCACG 
GATATTAGTT TACGAAACTT TAAATTTCCT ATACGTATAT AACATTATGT 
TATTATCGTT TGCATCTTGC CAAATTTGTT TCGGACTATA TGCAATTTAC 
GAAAAGAAGA AGAAAATCAT TAACATATGT CTCACGTACA CTCATTAAAT 
TTAGATGCCT ATACTTATTA ACGTGAAACA CCNGCAAAAG TCCTTTANTT 
GGTAAACCTA ATTAATCATN TCTT

3 prime edge [+] show sequence
1. Chromosome: 4; Position: 402250 [Map]; Strand: w
  - AT4G00930.1 - [+] show detail - COP1-interacting protein 4.1
    Distance: 1516; Region: intergenic
  - AT4G00940.1 - [+] show detail - Dof-type zinc finger DNA-binding family protein
    Distance: 1070; Region: intergenic
Flanking Genome Sequence: 16-0497-1 - 3-prime edge
```
GTTATTAGCT TATGCAATAA TTTTTACAAA ACTTTGTTCC GATCCATGTA 
AAAAAAAGAA GAGTGAAAAT ATATCAAACA CCACTTATTT TTAAAAAATT 
TGCTTAGTAA CAGATGACGA CAGGACGTGA AAGCT
```

AT4G00930.1

Model type: Protein coding
Short Description: COP1-interacting protein 4.1
Curator Summary: Encodes COP1-interacting protein CIP4.1.
Computational Description: COP1-interacting protein 4.1 (CIP4.1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; BEST Arabidopsis thaliana protein match is: COP1-interacting protein 4 (TAIR:AT5G37190.1); Has 16041 Blast hits to 11566 proteins in 1061 species: Archae - 57; Bacteria - 4473; Metazoa - 4631; Fungi - 1351; Plants - 620; Viruses - 68; Other Eukaryotes - 4841 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G00940.1

Model type: Protein coding
Short Description: Dof-type zinc finger DNA-binding family protein
Computational Description: Dof-type zinc finger DNA-binding family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: Dof-type zinc finger DNA-binding family protein (TAIR:AT3G61850.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR