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16-0513-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 17269232 [Map]; Strand: c
      • AT2G41430.1 - [+] show detail - dehydration-induced protein (ERD15)
        Distance: 0; Region: exon1 (5UTR)
      • AT2G41430.2 - [+] show detail - dehydration-induced protein (ERD15)
        Distance: 0; Region: exon1 (5UTR)
      • AT2G41430.3 - [+] show detail - dehydration-induced protein (ERD15)
        Distance: 0; Region: exon1 (5UTR)
      • AT2G41430.4 - [+] show detail - dehydration-induced protein (ERD15)
        Distance: 0; Region: exon1 (5UTR)
      • AT2G41430.5 - [+] show detail - dehydration-induced protein (ERD15)
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 16-0513-1 - 5-prime edge
    ACCAGAACCT ACGTTGCGAG AAGATGAGAA GAAGAAGGAC TAATATATAA 
    AGTAAGGTTC GGTGACGAAG CTGGGGTTCG TAACGTCGAG GCAGGATTAA
    AGGTGAGACA CAAGTGGGTA GGTCTGGACC CATAGCTAAC ATGGTTCTGA
    GTAATCAACC GTCCACGTGT AGACGCGTTA CTGTTGGCTT TTATTGACTT
    TCTTTTTCGT TCCAATCCTG TTGGCTACTC ACACTAAAAA GTTAAATTAT
    TATTCTTTCT ATAAAATATC TTAAATTTGG TCGGAAAGAG GATAAGGTAG
    GAGGAAACTA ATCCAATATA AGCCCATTTA TGACCGTATG GGCCTAACCC
    ACTCATGATT TTGTTTTACA TCATCATATT TGTGTGTTTG TGTTTTGTCT
    TCAGAAATCT GTTCATTAAT ATTTTTTTCC TTTACAGTGA ACTTCTCTGC
    TTTATTCGAT CAACAGTTAA ATTTACAAGC TGGTCTTTGT GTTAGATTCA
    AAAATTTCAT AGTGAGGGTT AGATAAGAGG ACGTTAAATG TGTAAGTGGG
    GTCATATGAT CACTAATAAC ATTCAATAAT TTGCTATTTT GGGTTTTGGC
    TTGATCTGAT GAATGTAGGG TCTGCATGTT TTGTCAGTTT GTGTGTGCGT
    GGCNTGAGTT TGATTGAATC ATGTTTATGG GAAGTTGATT GAATTACANC
    CCGGCCGTNG ACCACCTGNC CC

AT2G41430.1

Model type
Protein coding
Short Description
dehydration-induced protein (ERD15)
Curator Summary
Encodes hydrophilic protein lacking Cys residues that is expressed in response to drought stress, light stress and treatment with plant-growth-promoting rhizobacteria (Paenibacillus polymyxa), possibly revealing a connection between responses to biotic and abiotic stress. Also identified as a CTC Interacting Domain (CID) protein in a yeast two hybrid screen using the PAB2 protein as bait. Contains PAM2 like domain which mediates interaction with PABC domain in PAB2.
Computational Description
EARLY RESPONSIVE TO DEHYDRATION 15 (ERD15); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G14270.2); Has 169 Blast hits to 169 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 169; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G41430.2

Model type
Protein coding
Short Description
dehydration-induced protein (ERD15)
Curator Summary
Encodes hydrophilic protein lacking Cys residues that is expressed in response to drought stress, light stress and treatment with plant-growth-promoting rhizobacteria (Paenibacillus polymyxa), possibly revealing a connection between responses to biotic and abiotic stress. Also identified as a CTC Interacting Domain (CID) protein in a yeast two hybrid screen using the PAB2 protein as bait. Contains PAM2 like domain which mediates interaction with PABC domain in PAB2.
Computational Description
EARLY RESPONSIVE TO DEHYDRATION 15 (ERD15); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G14270.2); Has 169 Blast hits to 169 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 169; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G41430.3

Model type
Protein coding
Short Description
dehydration-induced protein (ERD15)
Curator Summary
Encodes hydrophilic protein lacking Cys residues that is expressed in response to drought stress, light stress and treatment with plant-growth-promoting rhizobacteria (Paenibacillus polymyxa), possibly revealing a connection between responses to biotic and abiotic stress. Also identified as a CTC Interacting Domain (CID) protein in a yeast two hybrid screen using the PAB2 protein as bait. Contains PAM2 like domain which mediates interaction with PABC domain in PAB2.
Computational Description
EARLY RESPONSIVE TO DEHYDRATION 15 (ERD15); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G14270.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G41430.4

Model type
Protein coding
Short Description
dehydration-induced protein (ERD15)
Curator Summary
Encodes hydrophilic protein lacking Cys residues that is expressed in response to drought stress, light stress and treatment with plant-growth-promoting rhizobacteria (Paenibacillus polymyxa), possibly revealing a connection between responses to biotic and abiotic stress. Also identified as a CTC Interacting Domain (CID) protein in a yeast two hybrid screen using the PAB2 protein as bait. Contains PAM2 like domain which mediates interaction with PABC domain in PAB2.
Computational Description
EARLY RESPONSIVE TO DEHYDRATION 15 (ERD15); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G14270.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G41430.5

Model type
Protein coding
Short Description
dehydration-induced protein (ERD15)
Curator Summary
Encodes hydrophilic protein lacking Cys residues that is expressed in response to drought stress, light stress and treatment with plant-growth-promoting rhizobacteria (Paenibacillus polymyxa), possibly revealing a connection between responses to biotic and abiotic stress. Also identified as a CTC Interacting Domain (CID) protein in a yeast two hybrid screen using the PAB2 protein as bait. Contains PAM2 like domain which mediates interaction with PABC domain in PAB2.
Computational Description
EARLY RESPONSIVE TO DEHYDRATION 15 (ERD15); FUNCTIONS IN: protein binding; INVOLVED IN: response to water deprivation, response to high light intensity, response to bacterium; LOCATED IN: cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G14270.2).
Link
InterPro Scan - TAIR