1. Home
  2. Mutant Lines
  3. 16-0530-1

16-0530-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 22535612 [Map]; Strand: c
      • AT3G60960.1 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
        Distance: -94; Region: promoter
    Flanking Genome Sequence: 16-0530-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATTAG 
    CTATGGGCTT TAAAAAAAAA ATGGCCTTAT GTTAAAANAA AATATNTNCG 
    TGTNTAAATG GCCTTTACCA TCATCGACTT TTAATTGCAA CTGCAAAACT 
    GAACCCTAAA AGNGATCAGT CATGTCCCTC CTCCGCCGCN TTGTCCNAAA 
    TTCNACCGTN TCAAAGGCTA TTCCGGCTGC NAAAAAGGCG TTCGTTCCTT 
    ACCCACTCGG AANANATCCT TCCTCACTCC CTACGCTNGA AACGGCCAGC 
    TACNTCGATC GCCGCCCAAT TTCTNTGCNC TACANAGTCA CGGCAATGAT 
    CGANATGTCT GTTCTCNACA AANCCTCNAA GCTNTCGCGT NTCGCTGTCT 
    CGGAAANATT TCNAGNGGAC ANANACNCCG TCTTTATNTG CAATTCCGTA 
    ATCGGCNCCN TGNGCANAGC CAAACGGTAC NACNAAGCCA TNTCTNTGTT 
    CGATTACTTT TTCAACNAGT CTCANACTNT CCCAAACATG CTCTCCTGCA 
    ATCTCATCAT CAAAGCACAC TGNGACCAAG GCAGNGTNNA CCACCCTCTT 
    GAGCTCTACC GCCNCATTTT GCTCGACGGG GAGTTTANCT NCAGGGATCG 
    AGACGTACAG GATACTGACN AAAGCCTTGG TCGATGCTAA AANATTAAAT 
    GAAGCT

AT3G60960.1

Model type
Protein coding
Short Description
Tetratricopeptide repeat (TPR)-like superfamily protein
Computational Description
Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G28380.1); Has 6360 Blast hits to 3266 proteins in 90 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 6335; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink).
Link
InterPro Scan - TAIR