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16-0540-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 14735155 [Map]; Strand: w
      • AT2G34925.1 - [+] show detail - CLAVATA3/ESR-RELATED 42
        Distance: 619; Region: intergenic
      • AT2G34930.1 - [+] show detail - disease resistance family protein / LRR family protein
        Distance: 1911; Region: intergenic
    Flanking Genome Sequence: 16-0540-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCT 
    ACAGTTGTTC CTACAGTTGT AGATTCTTCC TACAGTTGTT TCTCATTGCT 
    ATTTTTGCAC AATCTATCGT TCTTTGCTAA AGATAAAACT TCATTCAAAA 
    TTTGACCCGT AAAAAAATAC TAAATTTAAA ATAATGTAGG TTGTTTTAAA 
    TTTCACGTCA AATTTTATTA TACAGTAAAA TAATCTCGCT TTTTTTATTA 
    GTACCGAGTT TTATACACCG TAGCATCCAT TAGTTCAAGG AGTGATAAAA 
    AAGAAACAAA AACTATAGTT TCTCAAAAAA CCATTTGTAG TGATTGAATC 
    ACTGAACCAA TATCCTGTCA TGGATTGTCT AGACACATGT GAAGTCAAAC 
    TTTGGACACT CTGATTAATT AGTCTCAATT TATATTTTAG GGTAAGGTAT 
    AATATACTAT ATATCTATTT TAAGTATGTA TAAGAAAAGA AAAGAACCAT 
    TTAACTCCCA CAAAAATAGT TTTACCTGCC AAAATGGAAG TTTCTAATTT 
    TTGAATCAAA CAAGCAACAT AACAATTGTT GATTTTTGTA CCGTACGATC 
    TCATAAGCAA AGATATATAC TATCATACTA NGNTACATAT TCATACAACA 
    AGCTCTATAG GTTAAATATT TCTCTACCCT ATTGGAGATG GGATTTGGAC 
    CACTTGGGAC TCCATGTTCA TTGGCACCGA TCATNTTTTC CCTTNANCCA 
    TGTTGNCATC GGCCCGCGAC TCTAAACCTN NCTCTTCTTT CCCTTCANGC 
    GAAGTCNCGC CATGTCCTGA

AT2G34925.1

Model type
Protein coding
Short Description
CLAVATA3/ESR-RELATED 42
Curator Summary
Belongs to a large gene family, called CLE for CLAVATA3/ESR-related, encoding small peptides with conserved carboxyl termini
Computational Description
CLAVATA3/ESR-RELATED 42 (CLE42); LOCATED IN: endomembrane system; Has 7 Blast hits to 7 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G34930.1

Model type
Protein coding
Short Description
disease resistance family protein / LRR family protein
Computational Description
disease resistance family protein / LRR family protein; INVOLVED IN: signal transduction, defense response to fungus, defense response; LOCATED IN: cell wall; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase (TAIR:AT4G20140.1); Has 135121 Blast hits to 32840 proteins in 1181 species: Archae - 56; Bacteria - 8201; Metazoa - 34800; Fungi - 1569; Plants - 79859; Viruses - 2; Other Eukaryotes - 10634 (source: NCBI BLink).
Link
InterPro Scan - TAIR