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Mutant Lines
16-0570-1

16-0570-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 1; Position: 8183492 [Map]; Strand: c
- AT1G23080.1 - [+] show detail - Auxin efflux carrier family protein
  Distance: 0; Region: exon1 (5UTR)
- AT1G23080.3 - [+] show detail - Auxin efflux carrier family protein
  Distance: 0; Region: exon1 (5UTR)
- AT1G23080.2 - [+] show detail - Auxin efflux carrier family protein
  Distance: 0; Region: exon1 (5UTR)

GTNAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
CCCATCCTAC TTTCATCATC ACATAGAGAA CAGAGACTGA CACTAACTCA 
CTTCCTAACG GTTTCCACAC TCAAAATTAC ACTTTTGCCA CTCCGGCGAA 
CAACAATATG ATCACATGGC ACGACCTCTA CACCGTCCTC ACGGCGGTGA 
TACCACTCTA CGTAGCCATG ATCCTCGCTT ACGGCTCTGT CCGGTGGTGG 
AAAATCTTCT CACCAGACCA ATGTTCCGGC ATAAACCGCT TCGTCGCTAT 
TTTCGCCGTC CCTCTTCTCT CTTTCCACTT CATCTCCTCA AACAATCCTT 
ACGCAATGAA TCTCCGATTC ATCGCAGCCG ATACACTCCA AAAACTAATC 
ATGCTCACTC TCCTAATCAT CTGGGCTAAC TTCACTCGCT CCGGTAGTCT 
TGAATGGAGC ATCACAATCT TCTCTCTTTC AACACTTCCC AACACTCTCG 
TTATGGGAAT ACCTCTCTTG ATCGCCATGT ACGGAGAATA TTCCGGCTCA 
CTCATGGTTC AGATCGTTGT TCTTCAGTGT ATAATCTGGT ACACGCTTCT 
TCTCTTTCTT TTCGAATACA GAGGAGCTAA GATCTTGATC ATGGAACAGT 
TTCCAGAGAC TGGTGCTTCG ATTGTATCGT TCAAAGTTGA GTCCGATGTT 
GTTTCTTTAN ATGGACATGA TTTTCTTGAA ACTGATGCTC AAATCGGTGA 
CGATGGTAAG CTACCANCCC GGGCCGNNNA CCACGCGNNC CCTANA

AT1G23080.1

Model type: Protein coding
Short Description: Auxin efflux carrier family protein
Curator Summary: Encodes a novel component of auxin efflux that is located apically in the basal cell and is involved during embryogenesis in setting up the apical-basal axis in the embryo. It is also involved in pattern specification during root development. In roots, it is expressed at lateral and basal membranes of provascular cells in the meristem and elongation zone, whereas in the columella cells it coincides with the PIN3 domain. Plasma membrane-localized PIN proteins mediate a saturable efflux of auxin. PINs mediate auxin efflux from mammalian and yeast cells without needing additional plant-specific factors. The action of PINs in auxin efflux is distinct from PGPs, rate-limiting, specific to auxins and sensitive to auxin transport inhibitors. PINs are directly involved of in catalyzing cellular auxin efflux.
Computational Description: PIN-FORMED 7 (PIN7); FUNCTIONS IN: auxin:hydrogen symporter activity, transporter activity, auxin efflux transmembrane transporter activity; INVOLVED IN: response to cyclopentenone, root development, pattern specification process, auxin polar transport, longitudinal axis specification; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Auxin efflux carrier, subgroup (InterPro:IPR014024), Auxin efflux carrier (InterPro:IPR004776); BEST Arabidopsis thaliana protein match is: Auxin efflux carrier family protein (TAIR:AT1G70940.1); Has 1748 Blast hits to 1583 proteins in 451 species: Archae - 37; Bacteria - 919; Metazoa - 14; Fungi - 2; Plants - 486; Viruses - 0; Other Eukaryotes - 290 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G23080.2

Model type: Protein coding
Short Description: Auxin efflux carrier family protein
Curator Summary: Encodes a novel component of auxin efflux that is located apically in the basal cell and is involved during embryogenesis in setting up the apical-basal axis in the embryo. It is also involved in pattern specification during root development. In roots, it is expressed at lateral and basal membranes of provascular cells in the meristem and elongation zone, whereas in the columella cells it coincides with the PIN3 domain. Plasma membrane-localized PIN proteins mediate a saturable efflux of auxin. PINs mediate auxin efflux from mammalian and yeast cells without needing additional plant-specific factors. The action of PINs in auxin efflux is distinct from PGPs, rate-limiting, specific to auxins and sensitive to auxin transport inhibitors. PINs are directly involved of in catalyzing cellular auxin efflux.
Computational Description: PIN-FORMED 7 (PIN7); FUNCTIONS IN: auxin:hydrogen symporter activity, transporter activity, auxin efflux transmembrane transporter activity; INVOLVED IN: response to cyclopentenone, root development, pattern specification process, auxin polar transport, longitudinal axis specification; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Auxin efflux carrier, subgroup (InterPro:IPR014024), Auxin efflux carrier (InterPro:IPR004776); BEST Arabidopsis thaliana protein match is: Auxin efflux carrier family protein (TAIR:AT1G70940.1); Has 700 Blast hits to 605 proteins in 126 species: Archae - 0; Bacteria - 174; Metazoa - 8; Fungi - 2; Plants - 457; Viruses - 0; Other Eukaryotes - 59 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G23080.3

Model type: Protein coding
Short Description: Auxin efflux carrier family protein
Curator Summary: Encodes a novel component of auxin efflux that is located apically in the basal cell and is involved during embryogenesis in setting up the apical-basal axis in the embryo. It is also involved in pattern specification during root development. In roots, it is expressed at lateral and basal membranes of provascular cells in the meristem and elongation zone, whereas in the columella cells it coincides with the PIN3 domain. Plasma membrane-localized PIN proteins mediate a saturable efflux of auxin. PINs mediate auxin efflux from mammalian and yeast cells without needing additional plant-specific factors. The action of PINs in auxin efflux is distinct from PGPs, rate-limiting, specific to auxins and sensitive to auxin transport inhibitors. PINs are directly involved of in catalyzing cellular auxin efflux.
Computational Description: PIN-FORMED 7 (PIN7); FUNCTIONS IN: auxin:hydrogen symporter activity, transporter activity, auxin efflux transmembrane transporter activity; INVOLVED IN: response to cyclopentenone, root development, pattern specification process, auxin polar transport, longitudinal axis specification; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Auxin efflux carrier, subgroup (InterPro:IPR014024), Auxin efflux carrier (InterPro:IPR004776); BEST Arabidopsis thaliana protein match is: Auxin efflux carrier family protein (TAIR:AT1G70940.1); Has 1749 Blast hits to 1582 proteins in 451 species: Archae - 37; Bacteria - 920; Metazoa - 12; Fungi - 2; Plants - 486; Viruses - 0; Other Eukaryotes - 292 (source: NCBI BLink).
Link: InterPro Scan - TAIR