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16-0573-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 3102859 [Map]; Strand: w
      • AT1G09575.1 - [+] show detail - Protein of unknown function (DUF607)
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 16-0573-1 - 5-prime edge 
    ATATTTGGAC ATTGCCGTAC GCCTTATCAA ACCCATTGAC CACATTATTT 
    GACCCACGAA TCTGAAGATC TTAGCCTCTG GATTTGGTGA AAGCGAAATT 
    GAATAAAAGT TAGGTTCACA GATCAAACGA TTAAAAGATA TGAGAATCGG 
    AGAAAGAGAT GGAATAATAT AACGCGCTTA ATTATGATTC TTCTGTTATT 
    AATATCATAA GATTACACGA TTAGGAAAAT CGAAGAAAAG AAAAAAGAGG 
    ACAAGCACGA AGCCATTTGC TTTTTATCTA TCGAAAAGTA AAAAGATTGG 
    TACTAGCCAA TGGCCATTGT TGACTTGGCA TGAAGAATGG CTTTTACGAA 
    AATCTCAATC AATAAGTTAC AACTTTTTGT TAACTCAAAA ATCCACATTC 
    TAAATTTGAT TTTCTTGATA AAGTTGTATC TATTCTATCC AACAACCATC 
    CCGACAAAAG AAACAGTGAA AATGCCGTTG TTGAGACCTA TCCTTTTCAT 
    CGGAGTTGAA ATTGACGCGG AATATATACG GATTTAGGTT ACTTTATTAC 
    CCACATGACA AACAAACAAC ACGTAACTGA GTTTAAAAAG AGAAAAACAC 
    GATTAGTTTA CGTAAACTCT TGTTTAGTTT TTCTTGTCAA TTGTTTAGGT 
    GGCNTT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 3102746 [Map]; Strand: w
      • AT1G09575.1 - [+] show detail - Protein of unknown function (DUF607)
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 16-0573-1 - 3-prime edge 
    TGTCCAATGC CATTAGAGCT TCTTCGCAAA GGACATGGCT TGGTCACGGT 
    GGATTAAGAA GCTGCGTCAC CGTCAAAACA CCGTCGGAGG ATGAAGAGGA 
    GAAGAAGAAA GAGATAACTA TAGCGGAAGC GAAGAAACTA ATGAGGCTTG 
    TGAATGTTGA AGACATGAAG AAGAAGCT

AT1G09575.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF607)
Computational Description
Protein of unknown function (DUF607); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF607 (InterPro:IPR006769); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF607) (TAIR:AT1G57610.2); Has 384 Blast hits to 384 proteins in 123 species: Archae - 0; Bacteria - 0; Metazoa - 148; Fungi - 56; Plants - 127; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink).
Link
InterPro Scan - TAIR