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16-0584-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 83394 [Map]; Strand: w
      • AT2G01110.1 - [+] show detail - Sec-independent periplasmic protein translocase
        Distance: 0; Region: exon4 (3UTR)
    Flanking Genome Sequence: 16-0584-1 - 5-prime edge 
    GTAGCAAACT ATCTTTGATC AACAACCCTT CCCTCTGCAG CGTCTTAATC 
    ATATCTTCAG CTTGTAGTT

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 83278 [Map]; Strand: w
      • AT2G01100.1 - [+] show detail - unknown protein; Has 19420 Blast hits to 10641 proteins in 779 species: Archa...
        Distance: 0; Region: exon3 (3UTR)
      • AT2G01110.1 - [+] show detail - Sec-independent periplasmic protein translocase
        Distance: 0; Region: exon4 (3UTR)
    Flanking Genome Sequence: 16-0584-1 - 3-prime edge 
    TTTGCTACAT TTCAGAGTGT AAAAACCAAG ATGATTTGAT CACGATATTT 
    TGTAACATAC TCCTCTTAAC TGCGAGGTAT AATCAAAATA AAAACCATCT 
    TCTGCACATG CATTTCAGAG TTCAATTGGT TGTGTACCAT TCTTGCTACA 
    AATGTAAAAG TGAAAATCCG TCCTGGTCGA CGAATT

AT2G01100.1

Model type
Protein coding
Computational Description
unknown protein; Has 19420 Blast hits to 10641 proteins in 779 species: Archae - 0; Bacteria - 1003; Metazoa - 10257; Fungi - 1826; Plants - 1570; Viruses - 56; Other Eukaryotes - 4708 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01110.1

Model type
Protein coding
Short Description
Sec-independent periplasmic protein translocase
Curator Summary
mutant is Albino and pale green; Chloroplast Protein Translocation (tatC). Core subunit of the chloroplast Tat translocase. Integral chloroplast thylakoid membrane protein.
Computational Description
ALBINO AND PALE GREEN 2 (APG2); FUNCTIONS IN: proton motive force dependent protein transmembrane transporter activity; INVOLVED IN: thylakoid membrane organization, double fertilization forming a zygote and endosperm; LOCATED IN: chloroplast thylakoid membrane, receptor complex, chloroplast, integral to thylakoid membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sec-independent periplasmic protein translocase (InterPro:IPR002033), Sec-independent periplasmic protein translocase, conserved site (InterPro:IPR019820), Twin arginine-targeting protein translocase, TatC (InterPro:IPR019822); Has 5953 Blast hits to 5918 proteins in 1859 species: Archae - 177; Bacteria - 3492; Metazoa - 0; Fungi - 0; Plants - 81; Viruses - 0; Other Eukaryotes - 2203 (source: NCBI BLink).
Link
InterPro Scan - TAIR