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16-0591-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 8852153 [Map]; Strand: c
      • AT1G25250.1 - [+] show detail - indeterminate(ID)-domain 16
        Distance: 541; Region: intergenic
      • AT1G25260.1 - [+] show detail - Ribosomal protein L10 family protein
        Distance: 1806; Region: intergenic
    Flanking Genome Sequence: 16-0591-1 - 5-prime edge 
    GGATTGAGAC TAAGCTACAA CTACGAGAAT GTAACGATGG GAAAGAGAAA 
    GAAGCGACTC GTGATCATAT TTTATTAGGT GTACATCAAT CATTTCCACC 
    TGAGATTCGT ATGCAGAAAA TTTGACCTCT CTATCATTTT TTTCTCTCGA 
    ATTTAATGCA ATTACTACTG CTTCCCCTCC TCAATCAATG CTCCATTCAT 
    TATTTTTGTT TTGTATAGAA TT

AT1G25250.1

Model type
Protein coding
Short Description
indeterminate(ID)-domain 16
Computational Description
indeterminate(ID)-domain 16 (IDD16); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: indeterminate(ID)-domain 14 (TAIR:AT1G68130.1); Has 32987 Blast hits to 15964 proteins in 303 species: Archae - 1; Bacteria - 31; Metazoa - 31048; Fungi - 164; Plants - 739; Viruses - 10; Other Eukaryotes - 994 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G25260.1

Model type
Protein coding
Short Description
Ribosomal protein L10 family protein
Computational Description
Ribosomal protein L10 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: cytosolic ribosome, ribosome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L10 (InterPro:IPR001790); BEST Arabidopsis thaliana protein match is: Ribosomal protein L10 family protein (TAIR:AT3G11250.1); Has 1099 Blast hits to 1097 proteins in 339 species: Archae - 116; Bacteria - 0; Metazoa - 360; Fungi - 259; Plants - 172; Viruses - 0; Other Eukaryotes - 192 (source: NCBI BLink).
Link
InterPro Scan - TAIR