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16-0631-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 20689190 [Map]; Strand: c
      • AT5G50850.1 - [+] show detail - Transketolase family protein
        Distance: -200; Region: promoter
    Flanking Genome Sequence: 16-0631-1 - 5-prime edge 
    CCATTTGATG TTGTTGAAGT TTGTAAAGGA AAGTGGATGT GACCAAATTT 
    AATTTGACGT TATACTTATT TTAATTCAGA GAGATTCGCT TTTTTTAACT 
    AACCGAATCC ATAAAGATGC AAACCGAATC ATAATCCATA TCGGTTTAAC 
    TTTTCTTCGG TTCAAATGGT TCGGTTCGGT TTGGTTTAAG ATTGCAAAGA 
    ATCAGCTGGT CATTATGGCA GATGTTGAAG TAGCTATTCT TCTCCAAATC 
    GGTTGTGAAC TTAGTGAATG CAGAATCATT CTCTTGTGAA CCTGGAGATT 
    TGCAGAAGCT GCAGCTGAAT TAAAATGGAC TTAGCTCGCA AAAGAGCAGA 
    ATCAATAGGA TGTGATATGT TTCTACATTT TAAAGTGAAT TTGGAGTCTA 
    ATTGTAGTTT TGTAATCTGA AGTGCTAATT AGTTCAAAAC TCTGACAAAG 
    AAAAAAAAGA GAGCAAAACA CTGAATT

AT5G50850.1

Model type
Protein coding
Short Description
Transketolase family protein
Computational Description
MACCI-BOU (MAB1); FUNCTIONS IN: pyruvate dehydrogenase (acetyl-transferring) activity, catalytic activity; INVOLVED IN: defense response to bacterium; LOCATED IN: mitochondrion, nucleolus, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Transketolase, C-terminal (InterPro:IPR005476), Transketolase-like, C-terminal (InterPro:IPR015941), Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II (InterPro:IPR009014), Transketolase-like, pyrimidine-binding domain (InterPro:IPR005475); BEST Arabidopsis thaliana protein match is: pyruvate dehydrogenase E1 beta (TAIR:AT1G30120.1); Has 17839 Blast hits to 17830 proteins in 2804 species: Archae - 215; Bacteria - 11375; Metazoa - 619; Fungi - 227; Plants - 405; Viruses - 0; Other Eukaryotes - 4998 (source: NCBI BLink).
Link
InterPro Scan - TAIR