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16-0639-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 2753402 [Map]; Strand: c
      • AT3G09020.1 - [+] show detail - alpha 1,4-glycosyltransferase family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 16-0639-1 - 3-prime edge 
    ACCGTAGGTT AAACCGCTCT GGATCATCAC TCTTCACAGC GTTTGCTTCC 
    ACGGTTATAG CTCTGGTCGT TTTCACCATC GTTCTCGTCT CTAATTTATC 
    GGTGAGAGAA GATTTCTCAG CGAAGGTGGT GACAATAGAG ATCAAGACAA 
    TTGTTCCTTA CTTACCTCTA AGCTCAGAGA AGGAGGTAAG TGATCAAGTC 
    AACAATAACT ATTCGATCAA GCAACAAATC ACAGTCAAAG AAGAGATTAA 
    CAAACTGCAA GTTCTTGAAG TTTTTGGAGG CAAAAACGTG TCGGAGAAGT 
    TTCAACAGAG AGCAACAGAG TTTTTGAGAG ATGATTGTGA GGTCAAGTTC 
    ATGATGACAT GGATCTCACC TGCGGAATTG TTCGGTAAGA GAGAGATATT 
    ATCTGTAGAA AGCGTATTCA AATCTCATGC TAGAGGTTGT TTGATGATTT 
    TATCATCCAC AATGGATTCT CTTCAAGGGT TTAGAATCCT GAAACCGTTT 
    CTTGATCGAG GTTACAGAGT TATGGCGGTC ACGCCGGATT TGCCTTTTCT 
    TCTCAAGGAC ACAGCCGGAG AATCTTGGCT TGAAGAGATT CAGACCGGTA 
    AAAGAGATCA CCAGCT

AT3G09020.1

Model type
Protein coding
Short Description
alpha 1,4-glycosyltransferase family protein
Computational Description
alpha 1,4-glycosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: Golgi stack; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Alpha 1,4-glycosyltransferase conserved region (InterPro:IPR007652), Glycosyltransferase, DXD sugar-binding region (InterPro:IPR007577); BEST Arabidopsis thaliana protein match is: alpha 1,4-glycosyltransferase family protein (TAIR:AT5G01250.1); Has 364 Blast hits to 360 proteins in 67 species: Archae - 2; Bacteria - 16; Metazoa - 234; Fungi - 0; Plants - 87; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink).
Link
InterPro Scan - TAIR