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Mutant Lines
16-0663-1

16-0663-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 4; Position: 14129099 [Map]; Strand: w
  - AT4G28600.1 - [+] show detail - no pollen germination related 2
    Distance: -212; Region: promoter
Flanking Genome Sequence: 16-0663-1 - 5-prime edge
```
CTTAGTATCA AAGATTATGG AATAAATAAT TGAGAAATAC AAAAAGAAGT 
AATTAATGAA AAACCAAAAA TCAAGGGACC TGACATTTTC AACACGCGGA 
AATAAGAAAA ATAAAAAGGT AATAAATGGC TTTCGAGTAC ATATGTTTGG 
TTTTTAACTA AAGACCAGTC TCTTCTCGTG TTCCTAAAGC T
```

3 prime edge [+] show sequence

Chromosome: 4; Position: 14128984 [Map]; Strand: w
- AT4G28600.1 - [+] show detail - no pollen germination related 2
  Distance: -327; Region: promoter

GATACTAGTG GTCAGCAAAA CATTAAATAT TAATAAAGTG GTATATAAAA 
TGATGGAGCA TGTGAAATTA ACAACATATC ATGATTCATT TAAATTNCGC 
ATANCNNTNN CTTGTACATG TCTTACATAT TNTACCATTT ATATTTCTAA 
TAGTTGTTAC TATTAACATG AAAAAAGTGA ATTTTAAAAT ACATTATGTA 
TCTTGAAGGT TGAATTATTT TTGTCATTTT TTAATCTATT AATATGTGTG 
GAGACATCTA ATCGAGGGAG TACTGACTCT TGTTAGTTGT TAGGTAGATG 
TTTAGGTTAT AAAGTTGGAC ATTATAACGA TGTATAGAAA GTAGATATTG 
AATAAATAAA ACTAGCTGTC AATTGGTAAA ATGTAGAAAA TCAACTTCCA 
AATTTGAAGT TTAATATATG GTTAATTACA TCATTTAGAT ATATTTATCA 
AAAACATCTC ATCCATACTT AGTAAGTTAA TATTCATATC AATCTTTAAT 
ATATATTATG AATATATGTC ATAATAACAT GGCAGACGTA AGACGACCAA 
TAATAAAAAT AACTTAATGC CAAAACAAAT TTATATGATG AGATTTATGA 
GTAGACTCGT TAAAATATTC CTCAGTGAAA AGTATTGCAT ACCTCAATGA 
AATTGGTGTG AGGTCCATAA AAGAGAGTTC AAGAAAGAAA GTACACATAT 
TTACATTTTG AGTCATCGAA GTTCCATTTT ACAATATTAA TACGTCN

AT4G28600.1

Model type: Protein coding
Short Description: no pollen germination related 2
Curator Summary: encodes a calmodulin-binding protein that is expressed in pollen, suspension culture cells, flowers, and fruits.
Computational Description: no pollen germination related 2 (NPGR2); FUNCTIONS IN: calmodulin binding; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: tetratricopeptide repeat (TPR)-containing protein (TAIR:AT2G43040.1); Has 2060 Blast hits to 1763 proteins in 357 species: Archae - 278; Bacteria - 547; Metazoa - 329; Fungi - 78; Plants - 247; Viruses - 0; Other Eukaryotes - 581 (source: NCBI BLink).
Link: InterPro Scan - TAIR