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16-0710-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 32344 [Map]; Strand: c
      • AT4G00070.1 - [+] show detail - RING/U-box superfamily protein
        Distance: -918; Region: promoter
      • AT4G00080.1 - [+] show detail - Plant invertase/pectin methylesterase inhibitor superfamily protein
        Distance: -549; Region: promoter
    Flanking Genome Sequence: 16-0710-1 - 5-prime edge 
    TTTATAGCAC CTTCCCTTCA CTCTTTAAGC AAATCTGCAC ACACTTTTAT 
    TCTCTCCGAC CACACATTTA AACTCGATGC GTGTCTCCTC GATTCTCCAA 
    GACAT

AT4G00070.1

Model type
Protein coding
Short Description
RING/U-box superfamily protein
Computational Description
RING/U-box superfamily protein; BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G36950.1); Has 668 Blast hits to 668 proteins in 83 species: Archae - 0; Bacteria - 0; Metazoa - 32; Fungi - 45; Plants - 506; Viruses - 0; Other Eukaryotes - 85 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G00080.1

Model type
Protein coding
Short Description
Plant invertase/pectin methylesterase inhibitor superfamily protein
Computational Description
unfertilized embryo sac 11 (UNE11); FUNCTIONS IN: enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity; INVOLVED IN: double fertilization forming a zygote and endosperm; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Pectinesterase inhibitor (InterPro:IPR006501); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily protein (TAIR:AT1G62770.1); Has 574 Blast hits to 571 proteins in 37 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 574; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR