1. Home
  2. Mutant Lines
  3. 16-0734-1

16-0734-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 22255420 [Map]; Strand: w
      • AT3G60220.1 - [+] show detail - TOXICOS EN LEVADURA 4
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 16-0734-1 - 5-prime edge 
    GATNACACAN CCNGAGCCGT GGANCANNCG NGCCNTATAG TGAGAGGAAG 
    AAGACGGGAG CGTGATCCTC CGGTNCGAAT TNCGACAAAC AAACGGCGCA 
    ATCTCCGGAA TT

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 22255306 [Map]; Strand: w
      • AT3G60220.1 - [+] show detail - TOXICOS EN LEVADURA 4
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 16-0734-1 - 3-prime edge 
    NTTGGNNCNN CAGCTCNGGG CCGACTANCA CNCTTGNCCT ATATCCTCTC 
    TTCGCTTCAG AATCTGATCT CATGAAGTCT CTCGCCGTCG TCGGCTCAAA 
    CAACGGCGGA GGAGAAAACA GCTTCCGTCT CGAAATCGGA TC

AT3G60220.1

Model type
Protein coding
Short Description
TOXICOS EN LEVADURA 4
Curator Summary
Encodes a putative RING-H2 zinc finger protein ATL4 (ATL4).
Computational Description
TOXICOS EN LEVADURA 4 (ATL4); FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G72200.1); Has 8923 Blast hits to 8901 proteins in 292 species: Archae - 0; Bacteria - 8; Metazoa - 2301; Fungi - 667; Plants - 4759; Viruses - 54; Other Eukaryotes - 1134 (source: NCBI BLink).
Link
InterPro Scan - TAIR