16-0741-1 - RIKEN Arabidopsis Genome Encyclopedia
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16-0741-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 403734 [Map]; Strand: c
      • AT4G00940.1 - [+] show detail - Dof-type zinc finger DNA-binding family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 16-0741-1 - 3-prime edge
    CTTGCATAGG GGAGGAGAAG GATAGGCTGA GGTCATTATT GTTTTGATGC 
    GTCTTGCTAG GGTTTGATGA TGAAGCTGAT GATGTGAAGA CGAAAGGAGG
    GTTGAGATCC GGGAGGTTCT TGGTGGAAGA AGAAGTAGAG GAATTAGGAA
    ATGGAAGCT
  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 403618 [Map]; Strand: c
      • AT4G00940.1 - [+] show detail - Dof-type zinc finger DNA-binding family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 16-0741-1 - 5-prime edge
    TATGCAAGAC AAGCGAGCTC AAGGGCATTA CGGTCATTTC AGTGAGCAAG 
    TTGTGACAGG AGGGCAGAAC TGTCTTTTCC AAGCTCCTAT GGGAATGATT
    CAGTTTCGTC AAGAGTATGA TCATGAGCAC CCCAAAAAGA ATCTTGGGTT
    TTCATTAGAC AGGAACGAGG AAGAGATTGG TAATCATGAT AACTTCGTTG
    TTAATGTGGA AGGAAGTAAG ATGATGTATC CTTATGGAGA TCATGAAGAC
    CGTCAACAAC ATC

AT4G00940.1

Model type
Protein coding
Short Description
Dof-type zinc finger DNA-binding family protein
Computational Description
Dof-type zinc finger DNA-binding family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: Dof-type zinc finger DNA-binding family protein (TAIR:AT3G61850.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR