Home
Mutant Lines
16-0793-1

16-0793-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 2; Position: 320369 [Map]; Strand: c
- AT2G01720.1 - [+] show detail - Ribophorin I
  Distance: -105; Region: promoter
- AT2G01730.1 - [+] show detail - cleavage and polyadenylation specificity factor 73 kDa subunit-II
  Distance: -109; Region: promoter

GGCGGCAAAG TGTTCAGTGA CATCGGAACC GTTCGGAGTT ATTACACGTG 
TCTGATCCAA CCGTCGATAT TTTTGTGGTG TGAAGCCCAA TAATAGTTCT 
TCTCACGGCC CATTAAATTT AAAAGTTTGA AACGACAACG TCTCATGTCG 
TTTTTAATCT GAGGAAGAAA AAAGCTCGTA ACTAATCCCT AAATCAAGAG 
AGAAGTGAGA GACACTGAGA CTTTGTAGTT GACCGGATCA TTCTCACTTC 
GCCGGCCGAC GTTCTTCCTT CCGCCGTCGG TATCTATATT TACGATCCAC 
GATCTCTCTT GCTGTTTCTG TCTTCATCGG TGAGTAATTT TTTACTGATC 
TTCCAAATCC TATCAATTCA CCATCTCTGA GCTCTTTCGT TGATTTGAGT 
TTTGTTCTTA CTGCAGNGAC GAAAATGGCT GCTCGTATCG GGATCTTCTC 
CGNCTTCNNA NCNGNATTGN TATCTATTTN TGCATTTTCC TCANNTNAGG 
ATNTCNNANN NNNNTNCCNN NCCNAANGGN NNGANNNTNC

3 prime edge [+] show sequence

Chromosome: 2; Position: 320485 [Map]; Strand: c
- AT2G01720.1 - [+] show detail - Ribophorin I
  Distance: -221; Region: promoter
- AT2G01730.1 - [+] show detail - cleavage and polyadenylation specificity factor 73 kDa subunit-II
  Distance: 0; Region: exon1 (5UTR)

TTGCCGCCAT TCAAATTCGT TTGTCGACCT AACTCTGTTT CTTCTCTCGC 
CCCCTTCAAA ATTTTCTCCG GTCACTTGAA TTTGTGTTCT GATTCAACGA 
GTAAGATATT TTTGACCATC GACGAGTTTT GAAACTCAAA TTGTTGTTTA 
TTTCTTCAGT AACTATGGCT ATCGATTGTC TCGTACTTGG TAACAGTTTT 
TGTTCTTCTT CTTCTTCTCT CTTTGCTTCT TCAAAGTTTC ACAATTTCAA 
TTTCTGTATA ATTCTATCTT TTTTGTGTTG TATCCAGGTG CTGGACAAGA 
GATTGGAAAG AGCTGTGTGG TAGTGACGAT TAATGGTAAA AAGATAATGT 
TCGATTGTGG GATGCATATG GGCTGTGATG ATCACAATCG TTACCCAAAT 
TTTTCTCTCA TATCTAAATC CGGTGATTTT GACAACGCGA TCTCTTGTAT 
CATCATCACA CACTTGTATT GATTCTTCAA ACCCAGAATT TGTCCCTTTT 
TTAAAATTCA CTTTTTTAGT TTTTGTGGGT TTTAATTGTG AGTGTTAATA 
GCCATATGGA TCATGTTGGA GCGCTTCCTT ACTTCACGGA AGTTTGTGGG 
TACAATGGTC CGATTTATAT GTCGGNGAGT TATATTGTCC TCAAGGNGTT 
CGATGAAATG TTTGACTGAC TGGTTTTTTT TTNGGAA

AT2G01720.1

Model type: Protein coding
Short Description: Ribophorin I
Computational Description: Ribophorin I; FUNCTIONS IN: oligosaccharyl transferase activity, dolichyl-diphosphooligosaccharide-protein glycotransferase activity; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: endoplasmic reticulum, plasma membrane, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribophorin I (InterPro:IPR007676); BEST Arabidopsis thaliana protein match is: Ribophorin I (TAIR:AT1G76400.1); Has 386 Blast hits to 386 proteins in 178 species: Archae - 0; Bacteria - 0; Metazoa - 143; Fungi - 127; Plants - 63; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G01730.1

Model type: Protein coding
Short Description: cleavage and polyadenylation specificity factor 73 kDa subunit-II
Curator Summary: a homolog of cleavage and polyadenylation specificity factor that plays an essential role in the development of female gametophyte and embryo
Computational Description: cleavage and polyadenylation specificity factor 73 kDa subunit-II (CPSF73-II); CONTAINS InterPro DOMAIN/s: RNA-metabolising metallo-beta-lactamase (InterPro:IPR011108), Beta-Casp domain (InterPro:IPR022712), Beta-lactamase-like (InterPro:IPR001279); BEST Arabidopsis thaliana protein match is: cleavage and polyadenylation specificity factor 73-I (TAIR:AT1G61010.3); Has 5072 Blast hits to 5039 proteins in 1435 species: Archae - 491; Bacteria - 2753; Metazoa - 569; Fungi - 259; Plants - 193; Viruses - 0; Other Eukaryotes - 807 (source: NCBI BLink).
Link: InterPro Scan - TAIR