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16-0807-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 346158 [Map]; Strand: w
      • AT5G01890.1 - [+] show detail - Leucine-rich receptor-like protein kinase family protein
        Distance: -1031; Region: intergenic
      • AT5G01900.1 - [+] show detail - WRKY DNA-binding protein 62
        Distance: 4850; Region: intergenic
    Flanking Genome Sequence: 16-0807-1 - 5-prime edge
    ATTATAAGGA CAACTATCAC TCTTCAACTT TAATTTCAAG TTGAATGTAT 
    TGTGAATCAA GATGTGACCA TCGTTTCTCA ATTCGATGGA ATTGTTTATC
    CATTGTTAGG TAGGTATAGA AATTGTCTTC TTTTCCTATA AAAACTGTAC
    ACCTTACCAA TTTTGTGTGT GTGTGTGTGT GTGTGNACGN GGTGTTTATT
    ATAAANGAGT NTNTCACNCC CAGAGAAAGA AAANAATNAC ATATNTGTGN
    GGTTTNCCCC ANACTANNGA TAGACGTCCC CNATNNGGTT TTATATGTAN
    TGNAAAATCC CTGTGCCCCC NGCNTTAANC ATGNGCNNGC CCCCANAAAA
    GACNNTNTTT TNTNTTTTTT TNTNNCNCNC NA
  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 346042 [Map]; Strand: w
      • AT5G01890.1 - [+] show detail - Leucine-rich receptor-like protein kinase family protein
        Distance: -915; Region: promoter
    Flanking Genome Sequence: 16-0807-1 - 3-prime edge
    CTTATAATAT CTGTATATTG AACAAAACAT TGTTACTAAG AATTTGTGTT 
    AATCATAACC AAAAAAGGAG AAGTTAGAAG TAGATTTTTT TTTTTTNGAA
    AAAACCTTTA AACCANTTNT CCNCNGGGGN GTGGGGGANC ATNANNGNAA
    GGGTTTCCAA ANGGNAANCA TTTTTTTTTT TTTTTTTTNC CCNGGGAAAN
    NAAANANGGG GGNGGGGGGG GNNNNNCNTN GGGNAAAAAN NNNNGGGGGN
    GNCNNNNAAN CCNNGGGGGG GNNNNTTTTT TTTTTNCCCC CCA

AT5G01890.1

Model type
Protein coding
Short Description
Leucine-rich receptor-like protein kinase family protein
Computational Description
Leucine-rich receptor-like protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G56370.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G01900.1

Model type
Protein coding
Short Description
WRKY DNA-binding protein 62
Curator Summary
member of WRKY Transcription Factor; Group III
Computational Description
WRKY DNA-binding protein 62 (WRKY62); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 38 (TAIR:AT5G22570.1); Has 3146 Blast hits to 2717 proteins in 131 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3132; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink).
Link
InterPro Scan - TAIR