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16-0814-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 17954082 [Map]; Strand: c
      • AT4G38340.1 - [+] show detail - Plant regulator RWP-RK family protein
        Distance: -628; Region: promoter
    Flanking Genome Sequence: 16-0814-1 - 5-prime edge 
    ACTGCATCAT TATCAACCTT ACTCATCATA CGTGTTATTC TAATTAATGT 
    TAGAAGATTA GTAGCAAAAT GTTGCTTTTG TAGGGACATG ACCCACACTT 
    CTTTATTTTC GATTCCAAAA ACTTCACATA ATTTACCTTG ATTAGTTCTT 
    TCTTCTCTTT TTTTAAATAT ACTTGATTCC TTTGGGTCGA AAACAGTTTG 
    TAACTAAACA TTCTTTTTTT TTCTTTTCGA TAAATTTATA ATTTACCATA 
    AATTAGTACN CANATGATTA CCGTACGTGT TAGCTTTTTT AGTTCAATAT 
    NTAAAAGGCA GATNTNTAAT AATAAACTAA ANATTNTTAT NTAANAGGGG 
    GCTACTGCCT ACCTAGCTAG CTACTTGCAG TATACTATAT GTTTCCATAA 
    TTAAAAAAAG GGATTCGTTA ATGCTTTTGC TTTATAAANA CN

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 17954150 [Map]; Strand: c
      • AT4G38340.1 - [+] show detail - Plant regulator RWP-RK family protein
        Distance: -560; Region: promoter
    Flanking Genome Sequence: 16-0814-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATTGA 
    TGCTGCTGAA CCATTATTTC TGAGGATGCG GAGAATCGAT GAGAAGCT

AT4G38340.1

Model type
Protein coding
Short Description
Plant regulator RWP-RK family protein
Computational Description
Plant regulator RWP-RK family protein; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Plant regulator RWP-RK (InterPro:IPR003035), GAF (InterPro:IPR003018); BEST Arabidopsis thaliana protein match is: Plant regulator RWP-RK family protein (TAIR:AT1G76350.1); Has 720 Blast hits to 573 proteins in 47 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 7; Plants - 646; Viruses - 0; Other Eukaryotes - 63 (source: NCBI BLink).
Link
InterPro Scan - TAIR