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16-0816-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24772106 [Map]; Strand: w
      • AT5G61620.1 - [+] show detail - myb-like transcription factor family protein
        Distance: -277; Region: promoter
    Flanking Genome Sequence: 16-0816-1 - 5-prime edge 
    GNGATAAACN AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCAGATCC TACGCTGATT CTGCTGGATT TTTCCTTATA 
    ATGACTTGGG TAAAAACTTC CAAATAAAAC AAGATAATTA AGGAAACGCT 
    TTATCTCTTA AGGAAAATAA AAAAATGTAA AAACACCAAG GACATTCACA 
    AATAACAGCT CACGCATATC CGCATATATA TATATATATA TATATATNTA 
    CACACAAGAG AGAGGGGGGT GTATACACAC AGNGAGAGAN NGTGNGNGNN 
    TNTTTTGTGA GAGACNNCAN ACATGGGGGG AGAGAGAGAG AGNGAGAGAG 
    AGAGAGAGAG GGGGGANAAA ACGCGCNCNC NNTGNGGGNA NAGGGGNNAT 
    NACNCGCNNN CNTGTNTCNG GGGNGTANAN AGNGNGNGTG NGACAGTGNG 
    GNGCGTATAT ATATNGNGNG ANANNANAGC GCCCCGNGGG GNGANCGNGN 
    GANANAANAN NNTTNNNGGG NGANACNNNN NNNCTNTTNT CTCTNAAAAA 
    AANANAGNNG GGGGGGGAGN NTCTCTCNCC CCNGGGGNAG ANACNNGGTN 
    TCTNNCNGGG GGNGAGATAN TNNCNNAGNG GGGGGNNTCN GNNCGANAAA 
    AAAAAGGGGG NGCNCTNTNT TTTACTCTCN TNTGTGTGAG NCTNTATACN 
    CNGGAGAGAT ATANNAAAAA ATNNCNCNNG GGGGGGCCCC NGNGGGGGNA 
    AAAAAAANAC CNNTTTTTTT TTNNGNGGAA NACACAC

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24767485 [Map]; Strand: w
      • AT5G61600.1 - [+] show detail - ethylene response factor 104
        Distance: -55; Region: promoter
    Flanking Genome Sequence: 16-0816-1 - 3-prime edge 
    GGTAGTATGA TCTTTCTCGG TCCGATCCTC GAAACTCCCT CGAAGGCTCG 
    AACCCTCTCT TTGTTTTTTT ACCACTATAT AAGAAAGTCC GATTCCTCGT 
    CACTCTTATT CCCACTTCCA CACATACACA TATACAACAG AGCAAGAGAG 
    TCAATCAAGT AGAGTGAAGA TGGCAACTAA ACAAGAAGCT

AT5G61600.1

Model type
Protein coding
Short Description
ethylene response factor 104
Curator Summary
encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.
Computational Description
ethylene response factor 104 (ERF104); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G51190.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G61620.1

Model type
Protein coding
Short Description
myb-like transcription factor family protein
Computational Description
myb-like transcription factor family protein; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Zinc finger, CCHC-type (InterPro:IPR001878), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447); BEST Arabidopsis thaliana protein match is: myb-like transcription factor family protein (TAIR:AT5G47390.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR