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16-0862-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 13590906 [Map]; Strand: w
      • AT3G33055.1 - [+] show detail - transposable element gene
        Distance: 6932; Region: intergenic
      • AT3G33058.1 - [+] show detail - transposable element gene
        Distance: -10894; Region: intergenic
    Flanking Genome Sequence: 16-0862-1 - 3-prime edge 
    CGTATGAGTC TTTGGCTTTG TGTCTTCTAA CAAGGATACA ATTCTTACGC 
    CTTTAAGATC CGGTTGCAGG TTTAAGTTCC TCTACTCAAT CATACACATG 
    ACATCAAGTC ATATTTGACT CCAAAACACT AACCAACCTT CTTCTTGCTT 
    CTCAAAGATT TCATGGTGTA GCCAAAGTCC GTATGAGTCT TTGGCTTTGA 
    GTCTTCTAAC AAGGATAAAA TTCTTACGCC TTTAAGATCC GGTTGCGGTT 
    TAAGTTCTTC TACTCAATCA TACACATGAC ATCAAGTCAT ATTAGACTCC 
    AAAACACTAA CTAAGCTACC AGCCGCGGCC GNCNNCNACC CCNGGCGNNA 
    NANNNGANCN GNNGNNGNCN ANANGNNANN CNNGNGGNGN NNNNCNNNNN 
    NNGAGNTANG CNGGAGGGNN CGNNGNNTAT NTNAACACAN NNANNNANNN 
    GAGGGANCAN NNNANNNAAN GNGAGGANNN AANNNNCGNN NGGGNGGGGN 
    TGTNTNACNN GANGGGANNN GGTNANCGNA CGGCNTGGNN NGNTNNCGNN 
    AAGNNNAANA GANGNGNCNG AGTAGNNACC GAGNNCGNNC NGNGGAANGG 
    NNAAAAGNAN GCNNAANCAN GGAAGNNGTA GTGNTNNNGC NNGCGCNNGN 
    NNNNNCCCAC NNGNTATNNC CNNCNNGNGN CNANNANNNN NGNNNNNTCC 
    CNTGGNTTTG TCCGCNNTNN NNNCCNGTNN NGATNGCC

AT3G33055.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
gypsy-like retrotransposon family (Athila), has a 3.2e-282 P-value blast match to GB:CAA57397 Athila ORF 1 (Arabidopsis thaliana)
Link
InterPro Scan - TAIR

AT3G33058.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
gypsy-like retrotransposon family (Athila), has a 2.4e-112 P-value blast match to GB:CAA57397 Athila ORF 1 (Arabidopsis thaliana)
Link
InterPro Scan - TAIR