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16-0876-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 26768179 [Map]; Strand: w
      • AT1G70990.1 - [+] show detail - proline-rich family protein
        Distance: -103; Region: promoter
    Flanking Genome Sequence: 16-0876-1 - 5-prime edge 
    GGTAACGCNA CGNGNCNACA NGNACAGTNT CNNAANNCGG GCGCGGATNA 
    NANTNCCGGG GATGAGANCA CNNNTGCCTN TANANCAAGC CNNANTCANN 
    ATNCTAGGGA TGNGANNNGG AGCGTTGNAA TNAGGGGTCN NATATGGACC 
    AANTAACATA CAATNGGCGT GACNTNGAAA TATANTTAAA TACAACTATA 
    GTGGAATTAT TAGCCTTTAA TCCACCGTCG NCCACCCAAA AATAAAATAT 
    TCACGAATTT ATACGCTTAA AAGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 26768026 [Map]; Strand: w
      • AT1G70990.1 - [+] show detail - proline-rich family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 16-0876-1 - 3-prime edge 
    GAGNGACTCG GTCGANCNGA TCACCAATGC ANGGCTCNTA NAANACGCNN 
    NCACCAAANT NTNAACGTCT TTTTACTGTC CAACACAAAG AATCTTCCCA 
    AACCTCTCTT TATTCGATTC TCCAGGCATA TAACAACCTC TNACCATGCN 
    CGGAGAAAAC TCGCCGTACA AAGGCTNTCG CCGNCACGCT CTTNACGACA 
    GTNGGGTTTN TNACGTTTNC AATGATCATC AACGCTTCAG ATTCATCAAC 
    CAAGTANAAA ACTCGAANAG GATC

AT1G70990.1

Model type
Protein coding
Short Description
proline-rich family protein
Computational Description
proline-rich family protein; BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT1G23040.1); Has 16801 Blast hits to 6974 proteins in 537 species: Archae - 26; Bacteria - 1654; Metazoa - 5189; Fungi - 1184; Plants - 5387; Viruses - 1054; Other Eukaryotes - 2307 (source: NCBI BLink).
Link
InterPro Scan - TAIR