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16-0894-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 2760470 [Map]; Strand: w
      • AT1G08660.1 - [+] show detail - MALE GAMETOPHYTE DEFECTIVE 2
        Distance: -676; Region: promoter
      • AT1G08660.2 - [+] show detail - MALE GAMETOPHYTE DEFECTIVE 2
        Distance: -676; Region: promoter
      • AT1G08670.1 - [+] show detail - ENTH/VHS family protein
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 16-0894-1 - 5-prime edge 
    CAACCAAGGG AAATCTAACT CTAAGTCGAA GAAGAAAGCA AGAGTTGAGC 
    AGTCTTGTGC TCATTTTCGA CGAATGGATG ATCATCCGCG ATACAATCAT 
    TTTCACAAGT TTGATGGTTA CTCAACATTA ACGAGCCGTC TCGTCCGTTG 
    TTCGTTTCAG AATGTATGAC AAAACTCGAG TTTCCAAATC CTGTGATCCG 
    ACCAATGCTT TGCTTACGGT TTCTTTCTCG CTCATCTTTA AGAAACATGT 
    CGTCTTCAAG CAATCTTAGT ACTTTCTCGG ATATGTTTCG AAC

AT1G08660.1

Model type
Protein coding
Short Description
MALE GAMETOPHYTE DEFECTIVE 2
Computational Description
MALE GAMETOPHYTE DEFECTIVE 2 (MGP2); FUNCTIONS IN: transferase activity, transferring glycosyl groups, sialyltransferase activity; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: Golgi apparatus, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 29 (InterPro:IPR001675); BEST Arabidopsis thaliana protein match is: Glycosyltransferase family 29 (sialyltransferase) family protein (TAIR:AT3G48820.1); Has 1529 Blast hits to 1526 proteins in 78 species: Archae - 0; Bacteria - 0; Metazoa - 1325; Fungi - 0; Plants - 155; Viruses - 13; Other Eukaryotes - 36 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G08660.2

Model type
Protein coding
Short Description
MALE GAMETOPHYTE DEFECTIVE 2
Computational Description
MALE GAMETOPHYTE DEFECTIVE 2 (MGP2); FUNCTIONS IN: transferase activity, transferring glycosyl groups, sialyltransferase activity; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: Golgi apparatus, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 29 (InterPro:IPR001675); BEST Arabidopsis thaliana protein match is: Glycosyltransferase family 29 (sialyltransferase) family protein (TAIR:AT3G48820.1); Has 1514 Blast hits to 1511 proteins in 76 species: Archae - 0; Bacteria - 0; Metazoa - 1320; Fungi - 0; Plants - 145; Viruses - 13; Other Eukaryotes - 36 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G08670.1

Model type
Protein coding
Short Description
ENTH/VHS family protein
Computational Description
ENTH/VHS family protein; CONTAINS InterPro DOMAIN/s: Epsin, N-terminal (InterPro:IPR001026), Epsin-like, N-terminal (InterPro:IPR013809), ENTH/VHS (InterPro:IPR008942); BEST Arabidopsis thaliana protein match is: ENTH/VHS family protein (TAIR:AT3G46540.1); Has 902 Blast hits to 902 proteins in 167 species: Archae - 0; Bacteria - 0; Metazoa - 537; Fungi - 217; Plants - 109; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink).
Link
InterPro Scan - TAIR