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16-0913-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 9740002 [Map]; Strand: c
      • AT1G27950.1 - [+] show detail - glycosylphosphatidylinositol-anchored lipid protein transfer 1
        Distance: -702; Region: promoter
    Flanking Genome Sequence: 16-0913-1 - 5-prime edge 
    AATTTACACA GAAAAAATTA TCTTGAGTAG CTATAGTGTT CATAGAAGAA 
    TAGTATATGG GCTGTGTTCG CTCTTCACTG TATCAATAAC TACATGCATG 
    TGACTCTTTG TGTTGGGTCC ATTTTCAACA AACCTCTTGT ATTGGGACGC 
    TAAATCCGTA AATCATGACA AAGACTCTTA AAAGTTAAAA ACAGTTGGAA 
    CTTTACAATT ATTGTTATGC CATTTCAACA TTTAACAACA AACTAATCAA 
    TCTAAGGATG ATTTGAGGTT GAATCCGAGG AAAATTTCAG ACAAAAAGTC 
    AGTTGAATTT GCTGTAAGTT TGTAACAGTT TACACTCTTA AGTCTGGCTA 
    TGTGCAAGGT TTGGCTAACA TTCTCTCACT TTATAAATTT GTACATACTC 
    ACACACATTT TTTTTTNATN ATGGCNCTNA TCTCTTNGCN CATGTNAAAA 
    ANGATTTTTA AAAAAAATAA TCCANCTGAT TCTTANTCNG ANNGNCAAGA 
    CAAANCTTAA AACTTCCANC CTCCCCGAAA ATTTTATCAC CAAAATATCT 
    ATCCTATATG ANCATTTTTT TTTGGGCCAA ACCTNNTAGN ANNAAAAAAT 
    TGGGTTTTTT TANNGGGAAN AAACTNTTNA TTTTCCAAAA AAAATNGGNC 
    NNAAATTTNN TTGCCCAANT TGGGGGGGGG NNTTNTTNAG GGC

AT1G27950.1

Model type
Protein coding
Short Description
glycosylphosphatidylinositol-anchored lipid protein transfer 1
Curator Summary
Encodes LTPG1, a lipid transfer protein with a predicted GPI (glycosylphosphatidylinositol)-anchor domain. Localized in the plasma membrane. Disruption of the LTPG1 gene causes alterations of cuticular lipid composition, but no significant changes on total wax and cutin monomer loads are seen.
Computational Description
glycosylphosphatidylinositol-anchored lipid protein transfer 1 (LTPG1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: lipid transport; LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT2G44290.1); Has 597 Blast hits to 593 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 597; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR