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16-1029-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 2844523 [Map]; Strand: w
      • AT3G09260.1 - [+] show detail - Glycosyl hydrolase superfamily protein
        Distance: -742; Region: promoter
    Flanking Genome Sequence: 16-1029-1 - 5-prime edge
    GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCTA ATATGGTGGT CAACAGTTGG AACCATGGTT
    GTATCATCTT AGAGCATATT TCCCAATTAA GACATGTCTA TCAGATAAGC
    TGTTGCTTAC AAATGTATTA ATGCTATCTA ACAAGTAACA AGGGTGACNT
    GGGTGAGCGA CACCACTCCT CTTTATGTGG ATACTGGATA CGCCTTTAAT
    CCATATCACA TGTTTCAGCT GCAGTCTAGA ATT
  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 2844522 [Map]; Strand: w
      • AT3G09260.1 - [+] show detail - Glycosyl hydrolase superfamily protein
        Distance: -741; Region: promoter
    Flanking Genome Sequence: 16-1029-1 - 3-prime edge
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    TTACTGATAA CATGTTGATT ACATTTTTTC TTTTCAGTTA TAACGATTAC
    TTTTTTGGGG AAATTATTGA TATAATATGA TTCATTGGAT GATCCGATAT
    CATGCATATA AAGTTGTATC TCGTGAAACA CGAGATAGTA TTATACTCCA
    TTCTTTCATT ATCGGAGTAT GTTTAAAATT TGAAAACAAA TACAGACACN
    GGACCGTGGT CTTTACCTTC AGAAAAAAAA AGAGAAAAAA AAACCATNCC
    NCNGTTTNTT NTAGGAGTNG TAAAAAATCG GGCANCNATN TTCNANGNGA
    GTTNTTNTTA GGGCCTTNTT NTTATNNGGN NTTNCTAAAT AAAANAATCN
    TNTAAATTNC NCATTTNAAT ATNCNCTCGT NGGNCNCCCG GAATNTTNTN
    TGTTNTAAAN GTTAAAAAAN TAAAANNAAN TCCACCGATC GNCGGNTNTA
    AAGTNTAAAC CNTNCAAATA AATCATCCTN TTNAAANNTA ANANCNGGNC
    NTNTAGTTTA GCCAAATAAA ANGGTAANNA ANCANTTTCC ACCCTNTANC
    GNCAATNTCC ANGTCCGTNG TANTAATTNG GATTTGACAG AAAACCCGAT
    TTTTTGNTTT NTCCAAAATG AAACCTTAAA AATTGATTAN TNTGGCCCGG
    CTGGGTTTTT TTTTAAAAAA CCCTANGGAG GGCCNTTTNT TGGTNCGANN
    ATCCCTTTTT AAAGAACGTT NCCATTNNTA AAAAACCNCC C

AT3G09260.1

Model type
Protein coding
Short Description
Glycosyl hydrolase superfamily protein
Curator Summary
Encodes beta-glucosidase.The major constituent of ER bodies. One of the most abundant proteins in Arabidopsis seedlings. Exist in an soluble (inactive) and non-soluble (active) form, most probably formed in a polymerization process. Involved in the mutualistic interaction between Arabidopsis and the endophytic fungus Piriformospora indica.
Computational Description
PYK10; FUNCTIONS IN: beta-glucosidase activity, copper ion binding, hydrolase activity, hydrolyzing O-glycosyl compounds, fucosidase activity; INVOLVED IN: ER body organization, response to salt stress, response to symbiotic fungus, cellular response to cold, response to osmotic stress; LOCATED IN: peroxisome, nucleus, vacuole, membrane, ER body; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase superfamily protein (TAIR:AT1G66280.1); Has 11331 Blast hits to 11008 proteins in 1473 species: Archae - 140; Bacteria - 7847; Metazoa - 701; Fungi - 200; Plants - 1444; Viruses - 0; Other Eukaryotes - 999 (source: NCBI BLink).
Link
InterPro Scan - TAIR