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16-1036-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 1120987 [Map]; Strand: w
      • AT2G03680.1 - [+] show detail - spiral1
        Distance: 0; Region: intron1 (5UTR)
      • AT2G03680.2 - [+] show detail - spiral1
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 16-1036-1 - 5-prime edge
    GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCCT ACTTCGAATT ATGGTGTTTT TATCCTCAAT
    TTTTGGAGAT TTGGTTTCTA CGGATTTCGT AGATTCAGGA ATTTAGAAAT
    GGTGATTCGA TTTCAATGGT TTTAGATC
  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 1120994 [Map]; Strand: w
      • AT2G03680.1 - [+] show detail - spiral1
        Distance: 0; Region: intron1 (5UTR)
      • AT2G03680.2 - [+] show detail - spiral1
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 16-1036-1 - 3-prime edge
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    TGATTCGAAG CATGATCGAG GAATCAAAAC ATAGGAATCT ACGATCTAAC
    TTCGTCTAAG ACATCAGAGA AACGAAATCA AAGCGATCTG GAGAATTTTA
    GGGGTTAAGA AACAAACCTT TTGGTGATTC GCGATCAGAT C

AT2G03680.1

Model type
Protein coding
Short Description
spiral1
Curator Summary
The SPR1 gene encodes a plant-specific 12-kD protein which has a repeated motif at both ends, separated by a predicted rod-like domain, suggesting that it may act as an intermolecular linker. Ubiquitously expressed and belongs to a six-member gene family in Arabidopsis; expressed in transgenic seedlings localized to microtubules within the cortical array, preprophase band, phragmoplast, and mitotic spindle.
Computational Description
SPIRAL1 (SPR1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: anisotropic cell growth, unidimensional cell growth; LOCATED IN: spindle microtubule, cortical microtubule, transverse to long axis, preprophase band, phragmoplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: SPIRAL1-like2 (TAIR:AT1G69230.2); Has 191 Blast hits to 165 proteins in 37 species: Archae - 0; Bacteria - 8; Metazoa - 3; Fungi - 6; Plants - 146; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G03680.2

Model type
Protein coding
Short Description
spiral1
Curator Summary
The SPR1 gene encodes a plant-specific 12-kD protein which has a repeated motif at both ends, separated by a predicted rod-like domain, suggesting that it may act as an intermolecular linker. Ubiquitously expressed and belongs to a six-member gene family in Arabidopsis; expressed in transgenic seedlings localized to microtubules within the cortical array, preprophase band, phragmoplast, and mitotic spindle.
Computational Description
SPIRAL1 (SPR1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: anisotropic cell growth, unidimensional cell growth; LOCATED IN: spindle microtubule, cortical microtubule, transverse to long axis, preprophase band, phragmoplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: SPIRAL1-like2 (TAIR:AT1G69230.2); Has 191 Blast hits to 165 proteins in 37 species: Archae - 0; Bacteria - 8; Metazoa - 3; Fungi - 6; Plants - 146; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink).
Link
InterPro Scan - TAIR