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16-1037-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 7722609 [Map]; Strand: c
      • AT1G21945.1 - [+] show detail - transposable element gene
        Distance: 489; Region: intergenic
      • AT1G21950.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 650; Region: intergenic
    Flanking Genome Sequence: 16-1037-1 - 3-prime edge 
    GCTGGAAAGG ACCTGNCCNG NCNGGNTACA CNGCNTGCCC TCNATGCTGA 
    ACCGGATATC AATACTTTTG GTTAGACAAA TTGGAAAAAG ATATCGGAAT 
    GGTTTAGTAA ATCGTTTGAT ATAGTAACTA TACATCACAA ATTCAGACTA 
    TATTTGTAAT TGATTTTAGA ATATTAGTAC TCTTTTGTTT TTACTGATTG 
    TCTTTTATCA CATTTCTAAC ATTGAGAGGT CAAATAGGCT TCAGAATTTC 
    CCATAATCCC CATTTAGTCA TTTTTACCAA ACAAAACTTA AAGCAATTGC 
    CTCATCTCAT GACATGTGGA ACGAAAAATT TATCGGATGG TTTAAAATAA 
    GACACGACTA TTTTGTCTTA AACTTAAAAC TCGGTTTCTC TATGCAAGAT 
    TTTAATTATT GGGATTAATT CTATCTTTAC CTTCCAAAGT GTGGGATCAA 
    TCAACAATCT ACACAATCAT TTTCCACAGT CGATGACTAT AACGTTCTAG 
    CGACCAATCT ACGTTTAGTT ATATTTACAT ATGTAAAATG CAAAATAGCT 
    TTTTAATTAA CTGATAGTTT TATTTTGATA CCCTGTAACA TAAGATACTT 
    GTTTTCTTCA TTTTTTCAAA TTTGATACGT GAAATATTTA AGGATCAAGT 
    TATAATGAGC TCGATCATTA ATGAAAAGAT AATCTTGTTA CGAGCATTCT 
    GGTATCAAAT GGNACTCATA TGTTNATGA

AT1G21945.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
copia-like retrotransposon family, has a 1.7e-243 P-value blast match to gb|AAO73529.1| gag-pol polyprotein (Glycine max) (SIRE1) (Ty1_Copia-family)
Link
InterPro Scan - TAIR

AT1G21950.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G21940.1); Has 10 Blast hits to 10 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 10; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR