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16-1053-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 244436 [Map]; Strand: w
      • AT1G01670.1 - [+] show detail - RING/U-box superfamily protein
        Distance: 0; Region: intron4 (CDS)
    Flanking Genome Sequence: 16-1053-1 - 5-prime edge 
    GATAAACTAA CAAAATCGGT TATACTGATA ACGGTCGGTA CGGGATTTTC 
    CCATCCTACT TTCATAGATT ATTGCAGAAT AGAAGAATTG TTTAACAGCG 
    TTGTTCTGGA GACAGAGAAT GATACTGAAG ATATACGTAC TCGGAGTAGT 
    GTGAATCAGC AGTTGCCTCC CATGATAAGC T

AT1G01670.1

Model type
Protein coding
Short Description
RING/U-box superfamily protein
Computational Description
RING/U-box superfamily protein; FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: protein ubiquitination; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G61390.2); Has 3857 Blast hits to 3144 proteins in 246 species: Archae - 4; Bacteria - 101; Metazoa - 863; Fungi - 177; Plants - 1725; Viruses - 10; Other Eukaryotes - 977 (source: NCBI BLink).
Link
InterPro Scan - TAIR