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16-1054-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 11584741 [Map]; Strand: w
      • AT1G32172.1 - [+] show detail - other RNA
        Distance: 4194; Region: intergenic
      • AT1G32180.1 - [+] show detail - cellulose synthase-like D6
        Distance: 1775; Region: intergenic
    Flanking Genome Sequence: 16-1054-1 - 5-prime edge 
    GTGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCCA CGCATGAGGA ACAAAACGGC AGAGAACACA 
    TTAAGATGAT AAAAAGAGAC TCCAATGCAT CATCTAGGCA ACAAACATAA 
    ATTGAAACAG TGATCGACTG ATGATGAAAC AATTTAAACT CATCTACTTG 
    AACAAATAAC AGAGAAGTTT GATGAAACAA TTCCATAACA TTAAACTCTT 
    ATGATCACTC TTTATAAATC CATGTACGCG ATTATCCTAA TTGGTAGATC 
    TCATAACCAT CAAAAACAAC TAAATTCCAA CAGAAATCAA GCAAACAATT 
    TCAAAACTAA AACCCTAAAT TCCAAATCAA CATACACACT GATCGAAATC 
    TTGCGCATCT TCTTCGATTT GGTAGTACTA TCACACGATC CAAATCCAAT 
    CTGCGTATCC ATCGTTGGAT TATCACCGAC CCAAAATCGA AACCCTTGGA 
    TC

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 11584743 [Map]; Strand: w
      • AT1G32172.1 - [+] show detail - other RNA
        Distance: 4196; Region: intergenic
      • AT1G32180.1 - [+] show detail - cellulose synthase-like D6
        Distance: 1773; Region: intergenic
    Flanking Genome Sequence: 16-1054-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCAC 
    GCAGCGTGAG ATTGTTTCTG ATAGTTATGT TTTTCAGCTT GGATCTTTGT 
    CATACACATC AAGATTGAAA GTAATAAAGT TAGCAAGCGG TCAGATTTTG 
    GCTATATAAA CACCTCTTAC CAAGTTTTTC TTCTTCTTGG CATTGATTTT 
    GTGGTTTCAT TTTATGGTTT ATGTGTTGTA TTTCAGGTGA AATTTTGGCT 
    TAGTAGTAAG TCCAAGTAAG GGTCGTGTTT CTTGCCTCAT GCTGATATCT 
    TTGAGCATAT GACAGATCAG ATATCTCTCA CCCTATTCTC ATGTTTGTTG 
    TGTCATCTCG ACAGGTTATT TGTATTTGAA GAACTGAGTC TTGGCTTGTT 
    TTGGTTACTC ACACTATCGG AAAACACACG TTATCTAGAA ACAGACACGT 
    TCACAGACAC GAAAATCACT CAAACACAAT GCACTCAAAC TCAAAACACA 
    AACATAAACA CTCAAAACTC AAACACTACC AAAAACAAAT CATATCTCAC 
    GCAAAAAAAC CTCCAAACAC ACTCAAAGGT AACAAAAAAG CAGAACATAA 
    CAAAAGAAAC AAAATACAGC ACAACACAAA ACTAGACACA AGAAAGAAAA 
    AAAAANTCAT TAACGTCNCG GTTAATATCT TTTTTTCTTA TNGGNAAAAA 
    CTTNGAAATC CTGTGGCNAA GNCAATTTCA GGNAAGTNTN TTTATCTTCC 
    TATTTTTCTT CCGTTTTTTA TNTTTTACAC TTACAAGTTA CACCTTTTAA 
    TCTTTTTGTA ACAAT

AT1G32172.1

Model type
Other RNA
Short Description
other RNA
Link
InterPro Scan - TAIR

AT1G32180.1

Model type
Protein coding
Short Description
cellulose synthase-like D6
Curator Summary
encodes a gene similar to cellulose synthase
Computational Description
cellulose synthase-like D6 (CSLD6); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: plant-type cell wall biogenesis, cellulose biosynthetic process, polysaccharide biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: leaf whorl, flower; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150); BEST Arabidopsis thaliana protein match is: cellulose-synthase like D2 (TAIR:AT5G16910.1); Has 3332 Blast hits to 2680 proteins in 615 species: Archae - 13; Bacteria - 1453; Metazoa - 5; Fungi - 21; Plants - 1756; Viruses - 0; Other Eukaryotes - 84 (source: NCBI BLink).
Link
InterPro Scan - TAIR