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16-1094-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 177332 [Map]; Strand: w
      • AT2G01410.1 - [+] show detail - NHL domain-containing protein
        Distance: -925; Region: promoter
    Flanking Genome Sequence: 16-1094-1 - 5-prime edge
    GNATAAACTA ACAAAAATCG GTTAATACGA TAACGGTCGG TACGGGATTT 
    TCCCATCCTA CTTTCATCCC TAGGTTATTT TTGAAAAAAT CATATAATAC
    AATGGTTATT TTTTCACCTT TTAACATTTT TTGTATTTGT TTTTAAAAAA
    CCAATAATTT TTTGGACCGG TCCTCATCGC GACCAATCAA ATAAGCT
  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 177344 [Map]; Strand: w
      • AT2G01410.1 - [+] show detail - NHL domain-containing protein
        Distance: -937; Region: promoter
    Flanking Genome Sequence: 16-1094-1 - 3-prime edge
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTACCGACCA 
    TACATATAAG CACTGCTTAG CTTCTTAAAA CTTAAATATA TTTGCTGCCT
    AAAGCACTTT GATGGGCTTC GCCTCTAGGT CATGACCGGG CTTGGTCGCG
    GTATCAATGG CTCTCGTACC ACCTCAAAGC ATGATGTGTT CCATCATGTA
    CNTGTATTTT TCTAGGAGGC TAAATCACTT ACTTTGTTAA TTTTCCGTTA
    CGTTTGGGTT TATAACAATA CCTTATATGT ATTTAGAAAG ATACTTTACA
    AGCT

AT2G01410.1

Model type
Protein coding
Short Description
NHL domain-containing protein
Computational Description
NHL domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: Calcium-dependent phosphotriesterase superfamily protein (TAIR:AT2G16760.1); Has 137 Blast hits to 137 proteins in 39 species: Archae - 0; Bacteria - 57; Metazoa - 0; Fungi - 0; Plants - 76; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
Link
InterPro Scan - TAIR