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Mutant Lines
16-1143-1

16-1143-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 1; Position: 8630759 [Map]; Strand: c
  - AT1G24320.1 - [+] show detail - Six-hairpin glycosidases superfamily protein
    Distance: 0; Region: intron1 (CDS)
  - AT1G24330.1 - [+] show detail - ARM repeat superfamily protein
    Distance: -681; Region: promoter
Flanking Genome Sequence: 16-1143-1 - 5-prime edge
```
TCCATGATAA CTCTCTTTTT GCTTTTCTTC TTGTTTTCTC AGTGGAAAGT 
TTGACTTTTT GGAACTTTTT TTTTTTTNGN ANNAGTTCAA GGGGGNNCNN 
AGGNAANGCN NCNNCCCGGG NCCGGNANCN NCCCGGNCCN NAAAGGGGGG 
GGNNNAACNG GGGGGGGGGG NTNANNCCCC CCCGGNCCNG GGNNAANNNN 
NGNNNNTNNA
```

3 prime edge [+] show sequence

Chromosome: 1; Position: 8630875 [Map]; Strand: c
- AT1G24320.1 - [+] show detail - Six-hairpin glycosidases superfamily protein
  Distance: 0; Region: exon1 (CDS)
- AT1G24330.1 - [+] show detail - ARM repeat superfamily protein
  Distance: -565; Region: promoter

ACCATGGACA AGTCGGTGAG TTTAGGAGAA GGAAAAGGAG TGATAACACG 
AGGTCTCTGG GATTCATCAT CCAAAAGTGG TTTGATATCA CCAGATGGGC 
TTAATCCGGT CATCTGAGGA TAGATTTGAG AAATGTTGTG CTCTGTAAAA 
TGATCGTTGA AGCTGAGAAA TAACAAGCTA AAGCTATAGT AGGTGGACTT 
TTGAGCTATT TGACCAAATG TAGATCGTGA TAGCAACTGA TTGTCCTTTT 
TAAATACTTA TTGTTGTTGC CAAGTCTTTT TATAATACAG AAATTAGCTA 
TAACCATTTT ATAGTATTTG TCTACTACAC AATTTTCGAC ATCTCTCTCG 
TATCTTATCA TGAAGCCTTT CTCTTTGTGG CTGGTCCCGG TACGTTCTTT 
CACCAAAATT ATTTTCGGTA ATCCATTTTT TTTGGTATTG TTGTTGCCAC 
TTTTCCACAC GTGCGTTAAT TTTCTTATTC CAGCTCTTTT TGTTTTTGTT 
TTTTCTTGTC GTATCGAGAA CTCGTGTCTG GTTCGTGTTT CAATTACTAA 
TCGTAGATTT TTGCGAGTTT TGTGGAGCTG ACACAGTTCT TCTCTTTCTC 
ATCATCATCC CCATTTTATT CGTCTCTCTT CCTTCCGTTA TGCTCCATTT 
CTTCCGTTTT NCGNATTNNC TCTTCTCTTT TATTNNNATT NNCTGGGATA 
ATAATAAAAA CTCTTTCTGG AACAAGGNAA TCNATTTCTN TTTGGTTNTN 
GTNNCCAN

AT1G24320.1

Model type: Protein coding
Short Description: Six-hairpin glycosidases superfamily protein
Computational Description: Six-hairpin glycosidases superfamily protein; FUNCTIONS IN: mannosyl-oligosaccharide glucosidase activity, alpha-glucosidase activity, catalytic activity; INVOLVED IN: oligosaccharide metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 63 (InterPro:IPR004888), Six-hairpin glycosidase-like (InterPro:IPR008928); BEST Arabidopsis thaliana protein match is: glucosidase 1 (TAIR:AT1G67490.1); Has 471 Blast hits to 459 proteins in 200 species: Archae - 2; Bacteria - 99; Metazoa - 113; Fungi - 132; Plants - 45; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G24330.1

Model type: Protein coding
Short Description: ARM repeat superfamily protein
Computational Description: ARM repeat superfamily protein; FUNCTIONS IN: ubiquitin-protein ligase activity, binding; INVOLVED IN: protein ubiquitination; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT1G67530.2); Has 3064 Blast hits to 2955 proteins in 242 species: Archae - 0; Bacteria - 60; Metazoa - 394; Fungi - 149; Plants - 2167; Viruses - 3; Other Eukaryotes - 291 (source: NCBI BLink).
Link: InterPro Scan - TAIR