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Mutant Lines
16-1182-1

16-1182-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 4; Position: 7055456 [Map]; Strand: w
- AT4G11680.1 - [+] show detail - Zinc finger, C3HC4 type (RING finger) family protein
  Distance: 0; Region: exon1 (CDS)
- AT4G11690.1 - [+] show detail - Pentatricopeptide repeat (PPR-like) superfamily protein
  Distance: -798; Region: promoter

ATCATCATCA ACGACGACGA ACACAACAAC AGAATCAGAT TCATCATCTC 
TACCTACTCA CATCTGTAGA TCAAATTCCG ACGGAATCAT CGACACTACA 
CCATTTCTTC CTCCCACCGT TACAAGAACC ATAAGCGTAG ATGAAGAATC 
CAATCCAATT CATCGATCCG CTAGACGACA AGGTTTACGA GAAGCAGCGA 
GGTTCCTCCG TCACGCTGGT AGCCGGAGAA TGATGCGTGA ACCATCGATG 
CTCGTTAGAG AAACCGCTGC TGAGCAATTA GAAGAGAGAC AAAGTGATTG 
GGCGTATTCT AAACCTGTGG TGTTTCTTGA CATTTTGTGG AATCTTGCTT 
TTGTTGCCAT CGGTGTTGCT GTTCTGATAC TTAGCCGTGA CGAGAAGCCT 
AATATGCCGT TGAGAGTTTG GGTTGTTGGT TATGGGATTC AATGTTGGTT 
ACATATGGCT TGTGTTTGTG TTGAGTATAG GCGGAGGAGA CGACGACGTC 
ACCCGGAGGA TGGTGGTGGT TCTGGGTTGA CGAATT

AT4G11680.1

Model type: Protein coding
Short Description: Zinc finger, C3HC4 type (RING finger) family protein
Computational Description: Zinc finger, C3HC4 type (RING finger) family protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: Zinc finger, C3HC4 type (RING finger) family protein (TAIR:AT1G12760.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G11690.1

Model type: Protein coding
Short Description: Pentatricopeptide repeat (PPR-like) superfamily protein
Computational Description: Pentatricopeptide repeat (PPR-like) superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G39710.1); Has 58414 Blast hits to 14966 proteins in 309 species: Archae - 5; Bacteria - 45; Metazoa - 1145; Fungi - 1103; Plants - 53991; Viruses - 0; Other Eukaryotes - 2125 (source: NCBI BLink).
Link: InterPro Scan - TAIR