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Mutant Lines
16-1184-1

16-1184-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 3; Position: 23428526 [Map]; Strand: c
- AT3G63450.1 - [+] show detail - RNA-binding (RRM/RBD/RNP motifs) family protein
  Distance: 0; Region: exon1 (CDS)
- AT3G63450.2 - [+] show detail - RNA-binding (RRM/RBD/RNP motifs) family protein
  Distance: 0; Region: exon1 (CDS)
- AT3G63450.3 - [+] show detail - RNA-binding (RRM/RBD/RNP motifs) family protein
  Distance: 0; Region: exon1 (CDS)

CNTGATAAAC TAACAAAATC GGTTATACGA TAACGGTCGG TACGGGATTT 
TCCCATCCTA CTTTCATCCT GNGTCAACTT GCAACAGAGT GAAGCCCAAA 
GGTTGGAGCT TTTCTTTTTC TTTATTTTTT TCCTTCATCT GTATGGACGG 
GTATTCTGAA ACTTTGGTTG GTAAAATGTG TAGCAGAGCT GCTGCTTTGA 
TGATGGGCGA TGACTTGCAC AAATTGGGAA TATGGAGGCC AGAGAGGATC 
GACCTCTCGG CCACGGCCTG CCCGGCGTCT AGACAGATCT ATCTGACTTT 
CCCGGCTGAC AGTATCTTCA GGGAAGAAGA TGTTTCCGAC TACTTCAGGT 
ATTACTCTTG TTTGGAACCC ATTCATTCTT CTTGTTGGAT GTTGTCTACT 
TAAAGCAATG GTGGTGCAGT ACGTTTGGGC CAGTTCAGGA CGTGAGGATA 
CCTT

AT3G63450.1

Model type: Protein coding
Short Description: RNA-binding (RRM/RBD/RNP motifs) family protein
Computational Description: RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: Zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein (TAIR:AT3G51950.2); Has 366 Blast hits to 230 proteins in 33 species: Archae - 0; Bacteria - 0; Metazoa - 47; Fungi - 0; Plants - 313; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G63450.2

Model type: Protein coding
Short Description: RNA-binding (RRM/RBD/RNP motifs) family protein
Computational Description: RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: Zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein (TAIR:AT3G51950.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G63450.3

Model type: Protein coding
Short Description: RNA-binding (RRM/RBD/RNP motifs) family protein
Computational Description: RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: Zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein (TAIR:AT3G51950.2).
Link: InterPro Scan - TAIR