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16-1270-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 8607400 [Map]; Strand: c
      • AT1G24267.1 - [+] show detail - Protein of unknown function (DUF1664)
        Distance: 0; Region: exon1 (5UTR)
      • AT1G24267.2 - [+] show detail - Protein of unknown function (DUF1664)
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 16-1270-1 - 5-prime edge 
    GNGCCCCCAT NGNCNNATAC AAAATACGAG CCNCNCNATC GTGCTGTTGG 
    AGTACCNCTC TCNNNCTCTG CTCTATATAT CGTCCGNTGN CGCAAGAGTG 
    CATCATCTTT AACGCCGGCA CCTTCCCGCT GCTCTCTTCT ACCAATTCTC 
    TCTTAGATCT TCTCATGCGT CTTCTTCTTA TATCTTAATC CTTCGTCGTA 
    CAAGCTCGCC GGATTGAGTT TTCGTCTTCC ATGGCTATTC CTCTCGGGAA 
    GCTCACCATC CTCATCGGTG CAGGTCAGTA CTCTTGTGGG GGTTTTCTTT 
    TTTAGTGATT AATTGATCGG TGCTCGTACT CCTCTCTCGG GTTCTCATTT 
    GTTTCGTAGA TGGGGAATTG CATTTAGAGG ATGAGAAATT AGGGTTTTTG 
    ATAAACCCTT TTATAATGAT CACTGTTGCT TCACTGTCTT TCAATCATCG 
    AATCTTCTTC AGCTCAAATT TCAAGTCTTT TGATATTTTT TTAGNGNGCT 
    TCACTTTGGG TTTTCATCNG TTTCTTCGAC CAATCAGAAA TTGAACAAAG 
    GAACAGTTTT TACTCTCTTG TATGTGTNAG GGGAGATTAT TCANCGTTAT 
    TGGGAGACTA GNNTATGNTT AATTCCGGNG TGAATGCCCC AAAGNATGAT 
    GAATTTACCC TTTANNGNCT ACTGTGCGAT AATTNNNNNA CATNTGCTGA 
    AAGGNNAAAT ACANNNGCTT TTAAGNTAGG GGNTGGNGGG ANANNACNNN 
    CTAAAAAAAN

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 8607516 [Map]; Strand: c
      • AT1G24267.1 - [+] show detail - Protein of unknown function (DUF1664)
        Distance: -32; Region: promoter
      • AT1G24267.2 - [+] show detail - Protein of unknown function (DUF1664)
        Distance: -32; Region: promoter
    Flanking Genome Sequence: 16-1270-1 - 3-prime edge 
    AGGGACAGTG TTGTGTTCCT CAAGTGACTT GACATACAAT ACTTTTATTT 
    TATTAATTTT CTTATTGGGC CTAGAAAAAG GCCTTAGAAT ATGCTCTAAG 
    AAGATGCCCA TGAGGCATAA GGTTATTGAG ATTTGAGACT TTGACCAATT 
    CGAGATAACA AAACAACTTG AGAGGCTGAG AGCAGACCAC ACATGACATT 
    ACAAAGGCGT TTTTGCTAGA GTTATAAGCT

AT1G24267.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF1664)
Computational Description
Protein of unknown function (DUF1664); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1664 (InterPro:IPR012458); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1664) (TAIR:AT1G24265.2); Has 154 Blast hits to 152 proteins in 21 species: Archae - 2; Bacteria - 4; Metazoa - 0; Fungi - 1; Plants - 147; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G24267.2

Model type
Protein coding
Short Description
Protein of unknown function (DUF1664)
Computational Description
Protein of unknown function (DUF1664); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1664 (InterPro:IPR012458); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1664) (TAIR:AT1G24265.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR