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16-1276-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 4628388 [Map]; Strand: c
      • AT1G13500.1 - [+] show detail - Protein of unknown function (DUF1262)
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 16-1276-1 - 5-prime edge
    GGATACCACC TCAGTTCCTG ACGAGAAAAG GTTGGTCGGT TATTTTCTCG 
    GCCCCCGAAG TCGAAGACTA TGGTTTGATT GATGATGCAA AAGGCATAGT
    TGACGCAAAG CTGCGCTATG AGCNTTCCTG ATTTAGATAA CAGCGTTGTA
    GTTGGGAAAT GGTATGTTCC GTTCTTGTTT GTTAAGGAAG GTGATGCAAA
    TGATCAGATG TATAAGTCAA TGTATTATAG TATGACGCTT CAGCAAAGAT
    TTGAAGAGGT TTTCTTCTGT GAAAACGTTG GCAACAATAA ACGTTTTGAG
    GTTGTAGTTG ATGTGGAGGT AGAAACAGAA GTGGTCAAGC T
  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 4628462 [Map]; Strand: c
      • AT1G13500.1 - [+] show detail - Protein of unknown function (DUF1262)
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 16-1276-1 - 3-prime edge
    AATGAAAACG GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATCC 
    CATCTGAAGC AACAGATGTA GCAAAGAACT TCTTGGTTGA TGATCCTCCT
    TGATGGATCT CAAATTGTTG GTTTATGTCA AAAGGATC

AT1G13500.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF1262)
Computational Description
Protein of unknown function (DUF1262); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1262 (InterPro:IPR010683); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1262) (TAIR:AT1G13530.1); Has 101 Blast hits to 94 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 101; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR