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16-1328-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 22134010 [Map]; Strand: c
      • AT5G54510.1 - [+] show detail - Auxin-responsive GH3 family protein
        Distance: -332; Region: promoter
    Flanking Genome Sequence: 16-1328-1 - 5-prime edge
    ATGATCATTT CCTTTAAAGA GAATAATTTA AGTTAAATCA GGGGGTAGAA 
    AAAATTAATT CAACCATCAA ATATATTTTA TTAACTAAAA TAAAGTGGGC
    AGAATT
  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 22134126 [Map]; Strand: c
      • AT5G54510.1 - [+] show detail - Auxin-responsive GH3 family protein
        Distance: -448; Region: promoter
    Flanking Genome Sequence: 16-1328-1 - 3-prime edge
    ATGATCATGT GCTGTAGAGA AAAAAGGTAA TGAAATGATC ATGTAACAGG 
    AGATGCATTA TAATAGTTAA CATAGTGTTA TTGTTGTATC CATCGTTCAT
    ATTAACAATT AATAGAATGT ATAGATTTGA TTAAAAATGA TCATGTTGCA
    TATCTTGAAT T

AT5G54510.1

Model type
Protein coding
Short Description
Auxin-responsive GH3 family protein
Curator Summary
Encodes an IAA-amido synthase that conjugates Ala, Asp, Phe, and Trp to auxin. Lines overexpressing this gene accumulate IAA-ASP and are hypersensitive to several auxins. Identified as a dominant mutation that displays shorter hypocotyls in light grown plants when compared to wild type siblings. Protein is similar to auxin inducible gene from pea (GH3).
Computational Description
DWARF IN LIGHT 1 (DFL1); FUNCTIONS IN: indole-3-acetic acid amido synthetase activity; INVOLVED IN: auxin homeostasis, response to auxin stimulus, auxin mediated signaling pathway, unidimensional cell growth; LOCATED IN: chloroplast, cytoplasm; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: GH3 auxin-responsive promoter (InterPro:IPR004993); BEST Arabidopsis thaliana protein match is: Auxin-responsive GH3 family protein (TAIR:AT4G27260.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR