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16-1425-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 18499188 [Map]; Strand: c
      • AT1G49960.1 - [+] show detail - Xanthine/uracil permease family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 16-1425-1 - 3-prime edge 
    CNTTTAACGG NACAGGTATT TTACNTNCCG TTACCGACCG TTTTCATCCN 
    TNCCTCTAAT GGGTGGTGGC NTTTGTAAGC NTTAACCCTA ATCTCATCTA 
    ATAGCNTCAA ATTCACGAGA AGAAAACTCT TNCTAAATTA AATAAATTGA 
    TGTGAAACGA CGTCATTTTT CTTCAGGTGG AGAAAGCGGA AGTCATAAAC 
    ACAGTATTGT TCGTGTCAGG AATAAACACG TTGTTGCAGA GTTNGTTCGG 
    AAGTCGACTT CCTGTGGTCA TGGGAGCTTN TTATGCTTAC CTCATCCCTG 
    CTCTTTACAT CACTTTCTCT TATCGATTCA CTTACTATCT CCATCCTCAT 
    CTCGTTAGTC ACACAATCCA TTGTCTTCTT CTTTGAAAAC ATTTAAAGTT 
    TCAGATTAGT CGAAAACAGT AAATTAATGA ATGNGTTAAA TGCANAGATN 
    TGAAGAGACT ATGAGAGCTA TTCAAGGAGC TCTTATCATN GCTTCAATAA 
    GTCATATGAT AATGGGTTTC TTCGGTTNGN GGAGAATCCT GGGTCAGGTC 
    CGGAGAAAAA GATAAAAAGC TCATGTGTTG TCTTATATAT TATTACCTTG 
    TGGAAGAANT AACTAANACT TTAAGGTTTT NGCNTTTTGC NTTATTAAAA 
    CTTACTTTCA GGTTTNNTTT CTNCTNTTGT CGGCTGNTCC TTNTTNGNAT 
    TTCTCACCGA GNATTAGGCC NTCCTCGGCT TTTGNGTTTC NNTNANGTNN 
    ACNNATTCAA NATTTAACCT GCCANAANAG NATCCANTGG GTNATNATGN 
    ATCTNTGTTT NNTNNNTTAG NAGAACTAAA AANANNTT

AT1G49960.1

Model type
Protein coding
Short Description
Xanthine/uracil permease family protein
Computational Description
Xanthine/uracil permease family protein; FUNCTIONS IN: transmembrane transporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Xanthine/uracil/vitamin C permease (InterPro:IPR006043); BEST Arabidopsis thaliana protein match is: Xanthine/uracil permease family protein (TAIR:AT5G62890.3); Has 9237 Blast hits to 9206 proteins in 1901 species: Archae - 67; Bacteria - 7526; Metazoa - 351; Fungi - 134; Plants - 458; Viruses - 6; Other Eukaryotes - 695 (source: NCBI BLink).
Link
InterPro Scan - TAIR