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Mutant Lines
16-1470-1

16-1470-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

5 prime edge [+] show sequence
1. Chromosome: 5; Position: 16689079 [Map]; Strand: c
  - AT5G41740.1 - [+] show detail - Disease resistance protein (TIR-NBS-LRR class) family
    Distance: 0; Region: exon2 (CDS)
  - AT5G41740.2 - [+] show detail - Disease resistance protein (TIR-NBS-LRR class) family
    Distance: 0; Region: exon2 (CDS)
2. Chromosome: 5; Position: 16694430 [Map]; Strand: c
  - AT5G41750.1 - [+] show detail - Disease resistance protein (TIR-NBS-LRR class) family
    Distance: 0; Region: exon1 (CDS)
  - AT5G41750.2 - [+] show detail - Disease resistance protein (TIR-NBS-LRR class) family
    Distance: 0; Region: exon1 (CDS)
Flanking Genome Sequence: 16-1470-1 - 5-prime edge
```
TCCCCAGCAA TGGTAGCGAC ATGTGCCAAA GCATTTCTCC ATCGGATCTT 
CACCTCCTCA TTTTTCCCTT GACAAGTCTT CTCAAAAGCT
```

3 prime edge [+] show sequence

Chromosome: 5; Position: 16694546 [Map]; Strand: c
- AT5G41750.1 - [+] show detail - Disease resistance protein (TIR-NBS-LRR class) family
  Distance: 0; Region: intron1 (CDS)
- AT5G41750.2 - [+] show detail - Disease resistance protein (TIR-NBS-LRR class) family
  Distance: 0; Region: intron1 (CDS)

GCTGGGGAAC ACTCTCTTAA TTGGTATGTC TCAATGAATT TAGTGCTTTT 
TATTTTTCTC AAGCAATTTG TTTTCGTAAA TTTAGACCAA CCAGATCTAT 
TTGGTTTTGC TTTTGTTAGG GATAATGAAG CAAAGATGAT CCAAAAGATT 
GTTACAGATG TTTCAGACAA ACTGAATCTC ACACCGTCGA GGGATTTTGA 
GGGGATGGTA GGGATGGAAG CTCACTTGAA AAGATTGAAC TCTTTGTTAA 
GCCTGGAAAG TGATGAAGTC AAGATGATTG GAATTTGGGG TCCAGCGGGA 
ATTGGTAAGA CTACCATTGC TAGAACTTTA TTCAACAAAC TCTCTAGTAT 
TTTTCCGTTT AAATGTTTTA TGGAGAACCT CAAGGGAAGT ATTAAGGGTG 
GTGCTGAACA TTATTCCAAG TTGAGCTTGC AAAAGCAACT TCTGTCTGAG 
ATTTTGAAGC AAGAGAATAT GAAGATACAT CATTTAGGCA CAATCAAACA 
ATGGCTACAC GATCAAAAAG TGCTCATCAT TCTTGACGAT GTAGATGATC 
TTGAGCAATT AGAGGTATTG GCTGAGGATC

AT5G41740.1

Model type: Protein coding
Short Description: Disease resistance protein (TIR-NBS-LRR class) family
Computational Description: Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: signal transduction, apoptosis, defense response, innate immune response; LOCATED IN: intrinsic to membrane, chloroplast; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT5G41750.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G41740.2

Model type: Protein coding
Short Description: Disease resistance protein (TIR-NBS-LRR class) family
Computational Description: Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane, chloroplast; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT5G41750.2); Has 3146 Blast hits to 2582 proteins in 174 species: Archae - 0; Bacteria - 334; Metazoa - 256; Fungi - 13; Plants - 2498; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G41750.1

Model type: Protein coding
Short Description: Disease resistance protein (TIR-NBS-LRR class) family
Computational Description: Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT5G41740.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G41750.2

Model type: Protein coding
Short Description: Disease resistance protein (TIR-NBS-LRR class) family
Computational Description: Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: signal transduction, apoptosis, defense response, innate immune response; LOCATED IN: intrinsic to membrane; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT5G41740.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR