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Mutant Lines
16-1508-1

16-1508-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 4; Position: 62472 [Map]; Strand: w
- AT4G00160.1 - [+] show detail - F-box/RNI-like/FBD-like domains-containing protein
  Distance: -938; Region: promoter

GATTTGGGGA TGATTTCACG AGGAATTGTC ACGTTCATGT CAACAATTTC 
GTGGAGAAGC CTACTTATGA TCGAGATTGT TACGTTCAAG ACAACGACTT 
TGTCGATAAA CCTGTCCATG TTATCTACGA TGATGAGAAT AATGATTTGT 
CTCCTATATG CATATGATTC TTCTTTAATT GTCTGTTATT GTTATACTCT 
TACTTAAACC AAGTGTTTTC TCTTTGATTC TTCTTGGCAA CATTGTACTT 
AAAATTGTTT TCTTTAATCC ACTGAACCAT CAATAGCCAA AAAAAAAAAA 
AAANNNNAAA AANNCNAAAA ANCCNAGGGG TTTTTGGGGG NNAAAAAAAA 
AANNAAAAAN NTTTTTTTTN ANNCNAAAAA AAACNTTCCC AANNNNNAAA 
AAAANCCCNG GGGTNNTTTT TNTTNGNAAA AAANTTTNAA AAANNNCCNA 
TTTTTTNGGG GNNNANTTTT TTTTTCCCCG GGGGNNAAAA ACCNGGGGNG 
GGGAANNNCC NNGNCCCTTT TGGNGGGNNN NNNNNCCCCC CCCNNNNNNN 
NNGNGNNGGN CCCCCCCCCC CCCCCCC

3 prime edge [+] show sequence

Chromosome: 4; Position: 62356 [Map]; Strand: w
- AT4G00150.1 - [+] show detail - GRAS family transcription factor
  Distance: -3070; Region: intergenic
- AT4G00160.1 - [+] show detail - F-box/RNI-like/FBD-like domains-containing protein
  Distance: -1054; Region: intergenic

CCCAAATCCG GCTCTTTGTT TCACATTCTT CAAACGATTA GACACCGAAC 
TCGTGTAATG AGGAGGTAAA AAAGTTTTGC ATAGCTTCTC CTTAAGTTTA 
TCCCATGATT TAATAGGATT CTTGCCAGCT CGCTTGCGTG TTTTCTGCTT 
TTGTTGCCAC CATGATGCGG CTTGCCCTTT NAATTTCTTA ATCACAAGCG 
AAACAAATAG ATCATCCGAA ACGTTTTGAA ACTCCAAAAT TTCTTCAATC 
TTCACAAGCC AATCTAGTAA CGAATCACTA GAGATTCCAC CATGGAGCTT 
GGAAATATCA AACTTAAAAT TGGTCGCTCA TCTCATGTCT TTCACAGACA 
TCGCTGCAAG GGAATCAAAC CACCAGGAAC GACGTGGCTC TGATACCAAC 
TGATAGAAAG CGGAAGCTAA ATAACAGACA AAAACGCAAG ATTTTCAGGA 
GAATT

AT4G00150.1

Model type: Protein coding
Short Description: GRAS family transcription factor
Computational Description: HAIRY MERISTEM 3 (HAM3); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT2G45160.1); Has 2283 Blast hits to 2233 proteins in 293 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 2281; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G00160.1

Model type: Protein coding
Short Description: F-box/RNI-like/FBD-like domains-containing protein
Computational Description: F-box/RNI-like/FBD-like domains-containing protein; CONTAINS InterPro DOMAIN/s: FBD (InterPro:IPR013596), F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), FBD-like (InterPro:IPR006566), Leucine-rich repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana protein match is: F-box/RNI-like/FBD-like domains-containing protein (TAIR:AT3G52680.2); Has 2232 Blast hits to 2187 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2232; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR