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16-1536-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 10838624 [Map]; Strand: c
      • AT4G20000.1 - [+] show detail - VQ motif-containing protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 16-1536-1 - 5-prime edge 
    TAAAAACTAA CAAAATCGGT TATNCGATAA CGGTCGGTAC GGGATTTTCC 
    CATCCTACTT TCATNCCNGT CACCTCCGGC AGAACGTCCG GTAAATNTCT 
    GAACTAGGGC TCGGAAATTG CTAGGGTTTG CAGTTTAGGA GGGTTGTTGG 
    TATGGCTCTC CTCGAAGCCC TAGATCTCCT TCCAGCAGCN TTCATGTGCC 
    GCGGCACCAC CGTCTCCAAG GGAAGATCCC GACGATGACG CGATGTTAAT 
    GGCGTTGAAG CACGGAGTAA TCTCTTGAAT ATTTTGTTGC TCATAGTGTT 
    GTAACCACTG GTCTTCTCTA GAGTTGTTCA TAGGGATTTT ATATTTGTTT 
    GTCAATTTTT TTTTTTNTTN GGGGNACCTN GTNTNCNTNG CNTAGGAGGN 
    NGGATNAAGG TTTTANTTTN TNTGCGGNAA GGAAATGTAC CTAAGTNTTG 
    ANGGNCGTTN ACGTTNACTA NNNCCTTNGN GGATTTTAAT NTGTTTATGT 
    NCAAANAACT TCAATNTAAN AAATGGGGCA GGGNGTAAAT NNTTNGAGNG 
    TNNAATAAGT NTTTNAATTT NAAGTNTTAC CATAATCTTT TTNTTAATTA 
    AACTAATTTA TGGGGTAANA AATANCTGAG GATTCCCCTA AATNGANNAA 
    AACCAGGATT CCAAATTTTN TTGGGANCAT TTTATTNAAN GCTAAATNGN 
    ACACTTTNGG TTTNNAAAAG GNGGNTNNNT NAGTNTNGAC TTTGANGGGG 
    GGTTNCCTAN GGGNAAGAAA AATTTAATNG NACTANNNNA NNTTCCCCCN 
    NAATAAAAAA TGG

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 10838674 [Map]; Strand: c
      • AT4G20000.1 - [+] show detail - VQ motif-containing protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 16-1536-1 - 3-prime edge 
    GGTGAATCCA ACCGCAGAAA AGGTCCGGTG ACTTTGGATT TCGGGTCTCC 
    CACTACAATC TCCAAAGAAG CTATCTTTCC AGTCTCAAGC GATCGAAGTA 
    ATAACAATCT TGATCATGTG GTCAACCAAC ACNGTGAGTA ACGAGCAGCG 
    TCACNGTGAC TTGGTCAGGT ACAGAATCAA TGATGTCGTA TCAGTTAGGC 
    GAGGAAACTA ACTCGGCGGT TTACAGCAGC GGGTACGATG ATCAAGATCT 
    TCCGAGGGAA TACTCCGGGA ATAGTAGCTA TGATGAAAGT TTGGATCACA 
    TGGATTATTA TCAAGATTTC CACCGTGAGA CGGCAACATT GGAAGAGTTT 
    ATGATGAGAG ATCTCGATTT ATAATATAGC TTGTTTTTAG TCATTAGATA 
    TTATGAAGAT GATAATAATC ATGATCATCA TAATGTTACT TAGGGGAAAA 
    ACAAGTTTCT TAGAAATATT ACTTTACAAT TGATTTTCTA ATAATATTTG 
    AAGAAATAAA TAAAAAATGT TCCAAAAACT TCCAATATAT GATGTGAATT 
    TTGTACGAAT CACTTGAATT

AT4G20000.1

Model type
Protein coding
Short Description
VQ motif-containing protein
Computational Description
VQ motif-containing protein; CONTAINS InterPro DOMAIN/s: VQ (InterPro:IPR008889); Has 92 Blast hits to 92 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 92; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR