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16-1643-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 8643341 [Map]; Strand: c
      • AT1G24360.1 - [+] show detail - NAD(P)-binding Rossmann-fold superfamily protein
        Distance: 0; Region: exon11 (3UTR)
    Flanking Genome Sequence: 16-1643-1 - 5-prime edge 
    GCAGTAAGTG TTACATATTT CTTAACAGAA ACCGCAAAAT AGCAATCCGA 
    CCAAGTGCTA AAAAGAACTC AACTTTGTCT CTTTTACCAA ATTGTTTTAA 
    CTAAACAAAA GCCGACTCAT ACCAAATGTC TAGATAGCAA TACCTCCATC 
    AATGGTGAAT GCCTGCAAAC CAATATTTTC AACCATGGTT AGGTCGCTAA 
    CATAATTAGA AACCAAGGTT AACCACCATT CGACAGGAGT ATGAGATATT 
    AACCTGTCCG GTTATGTAAC TGGCTGCAGG ACTGAGAGCC AAGAATT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 8643457 [Map]; Strand: c
      • AT1G24360.1 - [+] show detail - NAD(P)-binding Rossmann-fold superfamily protein
        Distance: 0; Region: exon11 (3UTR)
    Flanking Genome Sequence: 16-1643-1 - 3-prime edge 
    CTTACTGCTT AAACTACGTA TTTGGTCACT TTCAGAAACT AGAAATCGAT 
    TAATCCAATC TCGCATTCTA AATTTTTTTA GTTATTGATG AAAAGGAAAC 
    TAGAACATCT CACTATCCTT ACCCTATGTT AAACTATTCA AGCACAAACA 
    AAATTCAAAC GCAACTTAGA GTCAAAAAGT AAAATAAAAC ATTACAGACG 
    CACCAAATAA CTTATTGGTT TGATTTGTAC GATCTAATCC GCATATGAAT 
    GCGGATATTG CCTAGTGACA AGCCAACCCC ACTGTATTTC TATGCCTTAA 
    ACAGCCTAGG ACTAGGAAAC AGCTGCCGTT TGAGACATAG GCAAAGCAAA 
    AGTGGGTCAC TCTTTTGGCA ATCTTAGAGT CTTGCCCACA AGACTGAAGC 
    ATCCCCGCTG CTCATCGAAG GCTCTTCTGA CTATAGCTAC GCGATCAACA 
    TCCTTACCAA CTCGAGCCTC GCACGAGTCC TTGTACTGTA TGTAGACAAT 
    TGCAAAATAT GTGCGGTTGA ATACCAAATC CACATCTTGG GGAGTAGTAT 
    CTATAGCCAC TTGGATAATC TTCAAGTTGG ACAGGTCATC AAGATCCCTA 
    ATGGTGCCCC TATTAGTGGT GGCAACTGCA AGTTCCAAGT AGAGACGAAT 
    CCAGTCATTG TCTTCTTGCA GCTCATAATA ATTCAACTGC AAAAAAAAAA 
    NAAAAAGCTA CNANCCNGGG CCGNNNACCC C

AT1G24360.1

Model type
Protein coding
Short Description
NAD(P)-binding Rossmann-fold superfamily protein
Computational Description
NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: 3-oxoacyl-[acyl-carrier-protein] reductase activity, copper ion binding; INVOLVED IN: oxidation reduction, metabolic process, fatty acid biosynthetic process; LOCATED IN: chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: 3-oxoacyl-(acyl-carrier-protein) reductase (InterPro:IPR011284), Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G29370.1); Has 133396 Blast hits to 132816 proteins in 3924 species: Archae - 1008; Bacteria - 83642; Metazoa - 7884; Fungi - 7548; Plants - 3127; Viruses - 5; Other Eukaryotes - 30182 (source: NCBI BLink).
Link
InterPro Scan - TAIR