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16-1769-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 8648689 [Map]; Strand: c
      • AT1G24388.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: exon1 (CDS)
      • AT1G24390.1 - [+] show detail - unknown protein; Has 1 Blast hits to 1 proteins in 1 species: Archae - 0; Bac...
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: 16-1769-1 - 5-prime edge 
    GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCCC GGCCCGGGGC AGAGGAGAGG GAGAAGAGCA 
    ATCCTCGGAA AAGATATAGG ATAGTGAATA GATCCGCGGT AATATTCTTC 
    ATCATTGTTA GTCGTTGTAA AGCGATTCAC ATATGTGTTT CATCGTCACA 
    CATCCTAACC CTCTTTCTTG TCGCTTCTAG AGTTCCTTTA TAAAGAGAGT 
    ACCAAGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 4636798 [Map]; Strand: c
      • AT1G13540.1 - [+] show detail - Protein of unknown function (DUF1262)
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 16-1769-1 - 3-prime edge 
    ATNAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    GTGACTTGAC TTTTCTGGAT GGCTCGTTGT AGGAAACTTC AAAGAAACTT 
    ACTTGATCTC CTTAAAGATC CTAGCCTACC CTAATTTCAC CTCTCATCAA 
    GTGTCTCTAA AATAAGATAA ACAAAGTCTT CGCCTCTCTG TATCATGACA 
    CCACTCTGCA TCATGAAGTA TTCAACGCTC CAACAACTCT GAAAGATGAC 
    ATTTTTATTT TCATTTTAAA CAGAGTTTAC ATCAATGTAA GAGTAGAAGA 
    CTAAATAAAA GAGAGAAAGC TCACAATTCA ATATTGGATA GTCCTCATCT 
    TATCAGCATG TCTAAACTCA TATGTCAACA CCAAACTCTC ATCCATTCTT 
    TTCAATTCAA ACTTCTCAAC CAATACATAA CATTTATAAC TCTTCCAATG 
    CGATGAACCG CCTTCGAACC GATCCAATCT CTTAACCGTC ACTCGGTTTC 
    CGTCTACCTT CTTCCACCCG AAACTCTCCT CTTCACTTTC CAACCTCTCC 
    ACAACCACTG ACCTTAAACC TATCTTCTTG TCTTTAACTT GGAACCAAAC 
    AATCCCTTTA GCATCCACAT TCGTTGTCTC TATACTAACC TTCTGTCCCT 
    CAACCTTAAT CACTTGGAGT TCAAGATCAA CATCAACAAC AACCTCAACA 
    CAATCTTCAT TGTGAATATT CTCATAGAAG AAAACTTCTT CCCATCTTTG 
    ATGAAGCGTC ATGTGGAATA CATTGGATAT TTTCACTTGA TCTATTATGT 
    CTCCTTCCTT TANAAATATG AA

AT1G13540.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF1262)
Computational Description
Protein of unknown function (DUF1262); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1262 (InterPro:IPR010683); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1262) (TAIR:AT1G13510.1); Has 101 Blast hits to 94 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 101; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G24388.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G17700.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G24390.1

Model type
Protein coding
Computational Description
unknown protein; Has 1 Blast hits to 1 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR