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16-1858-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 23202906 [Map]; Strand: c
      • AT3G62720.1 - [+] show detail - xylosyltransferase 1
        Distance: 0; Region: exon1 (3UTR)
      • AT3G62720.2 - [+] show detail - xylosyltransferase 1
        Distance: 0; Region: exon2 (3UTR)
    Flanking Genome Sequence: 16-1858-1 - 5-prime edge 
    GATACATGTA GNAATGNCTG NNTTAAGAGA GTCTACNAGG AGATNATATN 
    CNAAAGTGAT TGNGATGANG TTTTATTTGT TANGCTAAAG AGATTATGAT 
    GAAATAACGT CTACAATAAA TCATTAAATA CTCCATACAC GACTCCACCA 
    TGAATGGGAG ATCAAAACAA TTAAGTAAAC TACAAACAAA TAAAATTGAA 
    TAAAACAAAT AAACGTGTGT CCCCTAAACG CAAAATTAAA AGATACAAAA 
    CAATATATCC TCTCACTCAC TCACGTCGTC GTCGTACTAA GCT

AT3G62720.1

Model type
Protein coding
Short Description
xylosyltransferase 1
Curator Summary
Encodes a protein with xylosyltransferase activity, which is specific for UDP-xylose as donor substrate and for oligosaccharides with a degree of polymerization >4. Although the enzyme utilizes either cellopentaose or cellohexaose, its activity is four-fold higher with cellohexaose as an acceptor compared to cellopentaose. The enzyme is able to add several xylosyl residues to the acceptor forming mono-, di- and trixylosylated polysaccharides.
Computational Description
xylosyltransferase 1 (XT1); FUNCTIONS IN: xyloglucan 6-xylosyltransferase activity, UDP-xylosyltransferase activity, transferase activity, transferring glycosyl groups, transferase activity; INVOLVED IN: polysaccharide biosynthetic process, xyloglucan biosynthetic process, root hair elongation; LOCATED IN: mitochondrion, integral to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Galactosyl transferase (InterPro:IPR008630); BEST Arabidopsis thaliana protein match is: UDP-xylosyltransferase 2 (TAIR:AT4G02500.1); Has 441 Blast hits to 440 proteins in 92 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 134; Plants - 286; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G62720.2

Model type
Protein coding
Short Description
xylosyltransferase 1
Curator Summary
Encodes a protein with xylosyltransferase activity, which is specific for UDP-xylose as donor substrate and for oligosaccharides with a degree of polymerization >4. Although the enzyme utilizes either cellopentaose or cellohexaose, its activity is four-fold higher with cellohexaose as an acceptor compared to cellopentaose. The enzyme is able to add several xylosyl residues to the acceptor forming mono-, di- and trixylosylated polysaccharides.
Computational Description
xylosyltransferase 1 (XT1); FUNCTIONS IN: xyloglucan 6-xylosyltransferase activity, UDP-xylosyltransferase activity, transferase activity, transferring glycosyl groups, transferase activity; INVOLVED IN: polysaccharide biosynthetic process, xyloglucan biosynthetic process, root hair elongation; LOCATED IN: mitochondrion, integral to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Galactosyl transferase (InterPro:IPR008630); BEST Arabidopsis thaliana protein match is: UDP-xylosyltransferase 2 (TAIR:AT4G02500.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR