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16-1864-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 40525 [Map]; Strand: c
      • AT4G00110.1 - [+] show detail - UDP-D-glucuronate 4-epimerase 3
        Distance: -336; Region: promoter
    Flanking Genome Sequence: 16-1864-1 - 5-prime edge 
    CGTATTAAGT TGCAAATTTG ATTTAATTAA TCCCTAAACA TGTTACTAGT 
    TAGAGTTTGC ACGTGACGAT CTTGGGCAGC ACCTAAACAT GTATTTGTGT 
    GCGTAATTTT GTAATAAGTA AGTGCATCGA GTTTGATGAA TCAGTATTTG 
    AATGATAATT CGATGACAGT ACATTTGTTG CCATAAGAAC CCTAAAGTAA 
    GATCCATAAG GATGATGAAA GCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 40640 [Map]; Strand: c
      • AT4G00110.1 - [+] show detail - UDP-D-glucuronate 4-epimerase 3
        Distance: -451; Region: promoter
    Flanking Genome Sequence: 16-1864-1 - 3-prime edge 
    ATTAATACCA AGGCACATTT ATCCATGGGG TACAAAAAAG CAAAGAGTAA 
    TCTTCAAGGA ATAATATAAT AACAACACGC ATCTACTAGA CCGCATATAT 
    AATAGTAATA TCCATCAAAG CTCTATTTTA TTCTTCAAAT TCACTTATTG 
    TAAGATAAAA ACATAACGAT ATTGATTTAT AGTGACTAGT GAGTGACTAG 
    TGAGTGAGTC CGGGTAAATG TATGTGGAAA GGCACACTTG AACAACGTAG 
    AAAATGTCTT TATGATGTGT AAAAGAGAGC TTAGCTTAAC AAAAGTCTTT 
    AGCGGCTGCA ATAACCGTAT CCACGGTGAG TCCAAATTTC CTGTAGAGCA 
    CATTGGCTGG TGCACTTGCT CCAAAACTGT CTACACCGAT GGCTTTTCTT 
    TTGGAGCCAA CCATCTTCTN CCACCCAAAG GTCGACCCTG CTTCAATGCT 
    CACTCTTGCT GAACCCTCTC AAGGAACACA CCTTCCTTGG ATTCCTTCTC 
    TTGGTCATCA AACAGCTNCC AACTCACCAA TGACACTACT CTCACTGCTT 
    TCNTTCTTCT CTANCCTCCC TNCAGCCTTT GAGCTTTNTN TNCTNCGACC 
    CTGNCCCTTA NGATACCNCN GTTTGNCCCC GGGGGAGTTG CTGAAATACT 
    TTCCCCTTTA CCATTACCTT GACCAAATTC CNGTNAATNA GNCCTTTTGT 
    TTGGAAAAAC CCGGATNAAG GCCTTTTTGT

AT4G00110.1

Model type
Protein coding
Short Description
UDP-D-glucuronate 4-epimerase 3
Curator Summary
Encodes a putative membrane-anchored UDP-D-glucuronate 4-epimerase.
Computational Description
UDP-D-glucuronate 4-epimerase 3 (GAE3); FUNCTIONS IN: UDP-glucuronate 4-epimerase activity, catalytic activity; INVOLVED IN: cellular metabolic process, carbohydrate metabolic process, nucleotide-sugar metabolic process, metabolic process; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040), Nucleotide sugar epimerase (InterPro:IPR008089); BEST Arabidopsis thaliana protein match is: UDP-D-glucuronate 4-epimerase 2 (TAIR:AT1G02000.1); Has 43399 Blast hits to 43389 proteins in 2971 species: Archae - 792; Bacteria - 26013; Metazoa - 773; Fungi - 412; Plants - 1214; Viruses - 37; Other Eukaryotes - 14158 (source: NCBI BLink).
Link
InterPro Scan - TAIR