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16-1893-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 100894 [Map]; Strand: w
      • AT2G01150.1 - [+] show detail - RING-H2 finger protein 2B
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 16-1893-1 - 3-prime edge
    CNCCGTNCCA GCCGTTTTNT CCCTAGTCAC AGGCTGCAGT TGTCGGAGTA 
    GCGGTACGAG AAGAGGCGAT TTATGTTGAG CTGGTCGGCG ANGACGCTGA
    GGTTTGANNT AACAACAACA NCGGGGGCAN AAGAAGGGAA GAGGAGAAGA
    NACCAGGNCG TGTCTNAAGA AAGTTGCGAG GAGAGCCAGT AGCATCAGTG
    GGATCGAATC TGATGACACG TCGGAGAGCT GACCTTGTAG TCCCATTGAT
    ATGGTTTTAG AGATTGTTTT TATTTCTTTG GTTCTTGTTG TTGTTCTTGC
    TGCATATACT ACCTTGCATC TCATCTCTTT CTTCTTCTTT ATATGGATGG
    AGAAGAAGAA GANATGACAC AGGCCACGTG TTGTGGGACC CATTATTTTG
    CTTTTTGTTA AGCCCTTNCA CTTTCAGTCC TTTGCGTTNN TNCCCATCTT
    CATACTTTTC ACCCCGCTAT TTGCATTTTA TGATGAATAT GACCCAAAAC
    NTTTCACTTT TCTTATTTCT CACCCACATT NCCGGTTTAT TGGAAAANAG
    ATACTAAAGT NANAATTGAA TGACTNTAAA ATGTNTNTNG GATGCTGATC
    TCGATATCCN CTATCTNAGC TCCTTNCTNT CNNCAAAGAC CNAACNAAAT
    TNTTCAANAG GCCTTTAANN NTTTAGNTTT TACACCTNNA NAAAANNAAC
    TCTTNATNTT CCTAATGATC TATNCTGANC NCANNNTNCC TTTNCGTCGC
    CNCTCCNNCT TNNTA

AT2G01150.1

Model type
Protein coding
Short Description
RING-H2 finger protein 2B
Curator Summary
Encodes a RING-H2 finger protein that is expressed in vascular tissue, root tips, embryos and pistils.
Computational Description
RING-H2 finger protein 2B (RHA2B); CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING-H2 finger A2A (TAIR:AT1G15100.1); Has 8536 Blast hits to 8514 proteins in 269 species: Archae - 0; Bacteria - 0; Metazoa - 2151; Fungi - 713; Plants - 4534; Viruses - 16; Other Eukaryotes - 1122 (source: NCBI BLink).
Link
InterPro Scan - TAIR