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Mutant Lines
16-1969-1

16-1969-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 4; Position: 17935666 [Map]; Strand: c
  - AT4G38240.1 - [+] show detail - alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase, put...
    Distance: -341; Region: promoter
  - AT4G38240.2 - [+] show detail - alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase, put...
    Distance: -341; Region: promoter
  - AT4G38240.3 - [+] show detail - alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase, put...
    Distance: -365; Region: promoter
  - AT4G38250.1 - [+] show detail - Transmembrane amino acid transporter family protein
    Distance: 0; Region: exon1 (CDS)
Flanking Genome Sequence: 16-1969-1 - 5-prime edge
```
GGNGCNANNN NGNNCAGATT GAANGCTNTN NGGAATNACC NAGAACNNAA 
AATCCGACGA NATGCCATNA NGGACTNTNN NNNAAGGGCT TAANCACGAC 
ATGGATGAGG GGAGGTGCCG TTGCNGAAAA NAGGCGNGNG CTCTCTGGCC 
CGGTGGAGGT ATTTTAAGGG TATAAGAGGA GGAGCTAGCC TTCGTTCTGA 
AAACCCATCT GATGATTTTC GACCGAATCT CAGAAATCGA AGAAGATGGG 
GATGGATATT GGCGAATGGC GACAGCAAGA TAATTGGATG AATTGCGTGT 
AGAGTTGGTG GACTCTCTTT TTTGGTTTGT TGTCAGAGAT TTACAGAGGA 
AGAAGCTCGG CTCTATTTAT GGATGAAATG AAATGGTCAT CTTATCATTT 
TTACTGGGAA ACGGTACCGT TTTTGTTATA ACGCACGACG CCGTTTCAAA 
CAACTTCCTT ATTAGCTAGC TCCCTCCCGG CGGCAAAC
```
3 prime edge [+] show sequence
1. Chromosome: 4; Position: 17935773 [Map]; Strand: c
  - AT4G38240.1 - [+] show detail - alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase, put...
    Distance: -448; Region: promoter
  - AT4G38240.2 - [+] show detail - alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase, put...
    Distance: -448; Region: promoter
  - AT4G38240.3 - [+] show detail - alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase, put...
    Distance: -472; Region: promoter
  - AT4G38250.1 - [+] show detail - Transmembrane amino acid transporter family protein
    Distance: 0; Region: exon1 (CDS)
Flanking Genome Sequence: 16-1969-1 - 3-prime edge
```
ATGGCTCATG GGTGTCCTCC TCCTCGTCTC CGTCTCTGTT TTGACCCATC 
ACTGTATGAT GCTTCTTGTC TATACCCGCC GCAAGCTCGA CTCTTTCAAT 
GCTGGCATCT CCAAGATCGG CTCTTTTGGT GACCTTGGAT TCGCCGTCTG 
CGGCTCCTTG GGGAGGATCG TCGTTGACTT ATTTATCATT CTGTCTCAAG 
CTGGTTTTTG TGTCGGATAT CTTATCTTCA TCGGCACTAC TTTAGCTAAT 
CTATCCGATC CTGAATCGCC CACCAGTCTG AGGCATCAGT TTACAAGGCT 
GGGTTCTGAA TT
```

AT4G38240.1

Model type: Protein coding
Short Description: alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase, putative
Curator Summary: Encodes N-acetyl glucosaminyl transferase I, the first enzyme in the pathway of complex glycan biosynthesis.
Computational Description: COMPLEX GLYCAN LESS 1 (CGL1); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 13 (InterPro:IPR004139); Has 453 Blast hits to 453 proteins in 90 species: Archae - 0; Bacteria - 4; Metazoa - 330; Fungi - 0; Plants - 71; Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G38240.2

Model type: Protein coding
Short Description: alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase, putative
Curator Summary: Encodes N-acetyl glucosaminyl transferase I, the first enzyme in the pathway of complex glycan biosynthesis.
Computational Description: COMPLEX GLYCAN LESS 1 (CGL1); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 13 (InterPro:IPR004139); Has 453 Blast hits to 453 proteins in 90 species: Archae - 0; Bacteria - 4; Metazoa - 330; Fungi - 0; Plants - 71; Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G38240.3

Model type: Protein coding
Short Description: alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase, putative
Curator Summary: Encodes N-acetyl glucosaminyl transferase I, the first enzyme in the pathway of complex glycan biosynthesis.
Computational Description: COMPLEX GLYCAN LESS 1 (CGL1); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 13 (InterPro:IPR004139).
Link: InterPro Scan - TAIR

AT4G38250.1

Model type: Protein coding
Short Description: Transmembrane amino acid transporter family protein
Computational Description: Transmembrane amino acid transporter family protein; CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: Transmembrane amino acid transporter family protein (TAIR:AT2G42005.1); Has 5006 Blast hits to 4918 proteins in 286 species: Archae - 16; Bacteria - 54; Metazoa - 1812; Fungi - 943; Plants - 1365; Viruses - 6; Other Eukaryotes - 810 (source: NCBI BLink).
Link: InterPro Scan - TAIR