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16-1977-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 30190546 [Map]; Strand: c
      • AT1G80290.2 - [+] show detail - Nucleotide-diphospho-sugar transferases superfamily protein
        Distance: 972; Region: intergenic
      • AT1G80300.1 - [+] show detail - nucleotide transporter 1
        Distance: -1310; Region: intergenic
    Flanking Genome Sequence: 16-1977-1 - 5-prime edge
    GCNGTAGNTA NGNACANCNN ANNCANCAGT AAATATGNGT NGATGAAAAA 
    TCAAAATCTA GCNGAAAAGG ATTANCNACA CCGGGGCGGA TGATATANAT
    GGCCGAGAGG ATAATTGAGA GCCGTGGGAT GAAAGAGACN GGCTCCGATT
    GTCAGTTTTA CAAGTTGCCA AAGAAATATC CAAAGGCATG GAGCGTATTG
    CTGCATTGTT TATGGCTTAG GAAGATCCGA TACTCTCTCC TCTCGATTCT
    GTCTTTCTTT ATTCTCTTTT TTTTCTTATA GAAACATTAA CACTTGTGAA
    GTGGGACCAA ATCATTTCAC GAGGAGNACT AGTAACCCTT TTTAACAACG
    CAACGGNACC GATATTTTNC ACGTGGCCAA TAGTAAACGG NTNTAGAGAT
    GNAAANAAGG AGGCACTTTT GCTCAGACAC ATAANGACNG AANCGTGTTA
    TATNAGAGAA ACNGGGGTTN TATTGNGACN CGNNANANAA ANNNGCTGTA
    CCNGNGGGNG GGNACNNNGN NNTGCTTTNT CCGGANNTNG NAANAAAGGG
    AGACTNTNGN NTNAGGGGTA NAAAAGAAAT ANNNGAANGN NNGNNNNTNG
    GNANNGNANN NGNGANGGNN TGNTNGNGAN NNAANNGNNN CAAANNNNAN
    AAAAAAANAN NGNANNNGGG ANNAGGGNNN CGNANNNNNN NGGNGNANNA
    NNANTAAAAA ANATANAAAA AANAGNANNA NAAANAAAAA AA

AT1G80290.2

Model type
Protein coding
Short Description
Nucleotide-diphospho-sugar transferases superfamily protein
Curator Summary
a member of the Glycosyltransferase Family 64 (according to CAZy Database)
Computational Description
Nucleotide-diphospho-sugar transferases superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biological_process unknown; LOCATED IN: intrinsic to endoplasmic reticulum membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: EXTL2, alpha-1,4-N-acetylhexosaminyltransferase (InterPro:IPR015338); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferases superfamily protein (TAIR:AT3G55830.1); Has 640 Blast hits to 640 proteins in 93 species: Archae - 0; Bacteria - 0; Metazoa - 485; Fungi - 8; Plants - 102; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G80300.1

Model type
Protein coding
Short Description
nucleotide transporter 1
Computational Description
nucleotide transporter 1 (NTT1); FUNCTIONS IN: ATP:ADP antiporter activity; INVOLVED IN: transport; LOCATED IN: membrane, chloroplast envelope; EXPRESSED IN: stem, root, guard cell, callus, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: ADP/ATP carrier protein (InterPro:IPR004667); BEST Arabidopsis thaliana protein match is: TLC ATP/ADP transporter (TAIR:AT1G15500.1); Has 784 Blast hits to 777 proteins in 180 species: Archae - 0; Bacteria - 480; Metazoa - 8; Fungi - 28; Plants - 103; Viruses - 0; Other Eukaryotes - 165 (source: NCBI BLink).
Link
InterPro Scan - TAIR