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16-1978-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19587175 [Map]; Strand: c
      • AT2G47820.2 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: exon1 (5UTR)
      • AT2G47820.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: -233; Region: promoter
    Flanking Genome Sequence: 16-1978-1 - 3-prime edge 
    GATCCATCGT ATTCATATGC AGCAAAACAC ACACATTTAC ATACATATAT 
    ATATATATAT GNTGNGATTC TCATTTTTAT TTTTTATTTN NGGGGTCGCT 
    CTTTCTTGAG AAAGTCTGCG ACAGAGAGAG GAGAAAGAAT TTGGATGTGT 
    TGATGCTAAA GCTGTGTGAG TTTTACGAGA GCAGAGGTAA ATCTGAAAGC 
    TCTTTCCTTT CGACCACGTC TTCCTCTTCT TCCTCCTCTT CGTCTCCGTC 
    TTTTAACGCG ACTTGTCTTT CTTTTTTCTT TCTTTCTTTN TATATAATAT 
    CACTTTATAA GTTGTAATTT GTTTTGCGCT ATCGGTCTCG GCGTTTCTTC 
    TTCTTCTTCT TGNTGTNCGT ATCGNNACCT CTTCCTTCAC ACGCGAAGTT 
    GACATCTAGA TTCAATACAT AGATNGGCTC TGCTTTTTGA TTTTATTGCT 
    CCACGTTGAA TGTCCCGACT TCTTCTTTCT TCTTCTTCTG GGGAGGTNTG 
    NNGCCAAAGT CTTCCTATGT GACTATGTCT TGTCTTGTAT GCATACTACT 
    ACTAGCCTCG GCTCTTATGT NCAACAATNA CTCCTTTCTT TGTTTTCGTA 
    GCCATACGAA TCATGTATTT TTCATGAATN GGCGNGCCTT CCCTGGGTTT 
    TTGNTGNTNT CTTATGAANN GGGNCANNNT CTGTCNNCCC TANCTTNAAA 
    GCNGGNNNCA TTANGGNNTC TAATAAANAA AGAAAACGGN NGCTTTACTN 
    GGGTTNNGAA TCNTTTCNT

AT2G47820.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G09040.1); Has 628 Blast hits to 543 proteins in 149 species: Archae - 0; Bacteria - 106; Metazoa - 145; Fungi - 69; Plants - 97; Viruses - 10; Other Eukaryotes - 201 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G47820.2

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G09040.1).
Link
InterPro Scan - TAIR